Globicephala melas (long-finned pilot whale): 115844354
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Entry
115844354 CDS
T11080
Symbol
SLCO1C1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X3
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
gmf
Globicephala melas (long-finned pilot whale)
Pathway
gmf04081
Hormone signaling
gmf04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115844354 (SLCO1C1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
115844354 (SLCO1C1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115844354 (SLCO1C1)
Transporters [BR:
gmf02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
115844354 (SLCO1C1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
115844354
NCBI-ProteinID:
XP_030697205
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All DBs
Position
10:complement(85952931..86011465)
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AA seq
712 aa
AA seq
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MDTSSKENIQLFSKNSMQPVGKPSFKTEYPSSEEKQPCCGELKVFLGALSFVYFAKALAE
GYLKSTITQIERRFDIPSSLVGVIDGSFEIGNLLVITFVSYFGAKLHRPKIIGAGCLIMG
VGTLLIAMPHFFMEQYRYERYSPFSNSTFSISPCFLGSNSPLPISVMEKSQSKINNECEI
DASSSMWAYVFLGNLLRGIGETPIQPLGIAYLDDFANEDNAAFYIGCVQTVAIIGPIFGF
LLGSLCAKLYVDTGFVNLDHITITPKDPQWVGAWWLGYLIAGSISLLAAVPFWYLPKSLP
RPRSREDSNSSSEKSKFITDDHTDYQTPLGEKAKIMEMARDFLPSLKSLFGNPVYFLYLC
ASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVAFGIFSGGIVMKKFRIS
VCGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTKPVSYHERALFSDCNSRC
KCSETKWEPMCGANGITYASACLAGCQTSTGSGKTTIFNNCTCVGIATSKSGNSSGMVGR
CQKDNGCPKMFLYFLVISVITSYTLSLGGIPGYMLLLRCIKPQLKSFALGIYTLAVRVLA
GIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNAFRHMYLGLTMILGTMSIFLSIAV
LFTLKKKYVSKHRSFRTKRERTMVSTRIRKENCTTSDHLLQPSYWPGKETQL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatatccagttattcagcaaaaattcaatgcaacctgtt
gggaagccttcctttaaaacagaatatccctcctcagaggagaaacaaccctgctgtggt
gaactaaaggtgttcttgggtgccctgtcttttgtttactttgccaaagcactggcagaa
ggctacctgaagagcaccatcactcagatagagagaaggtttgatatcccttcttcactg
gtgggagttattgatggtagttttgaaattggaaatctcttagttataacatttgttagc
tactttggagccaaacttcacaggccaaaaataattggagcagggtgcctaatcatgggc
gttggaacattgctcattgcaatgcctcatttcttcatggagcagtacagatatgaaagg
tattctcccttctccaattccactttcagcatctctccatgtttcctggggtcaaacagt
ccattaccaatctcagttatggaaaaatcacaatccaaaataaataatgaatgtgaaatt
gatgccagctcctccatgtgggcttatgtcttcctggggaaccttcttcgtggcattgga
gaaactcccattcagcctctaggcatagcctaccttgatgattttgctaatgaggacaat
gcggctttctatattgggtgtgtgcagacggttgcaattataggaccaatctttggcttc
ctgttaggctcattatgtgccaaactgtatgttgacactggctttgtaaatctagatcat
ataaccatcaccccaaaggatccacagtgggtgggtgcctggtggcttggctatctaata
gcaggaagcataagtctgctggcagctgtgcctttctggtatttaccaaagagtctacca
agaccccggagcagagaggattccaattcctcctctgagaaatcgaagtttattacagat
gatcacacagactaccaaacacctcttggagaaaaagcaaaaatcatggaaatggcaaga
gattttcttccatcactgaagagtctttttggaaatccagtgtacttcttatatttgtgt
gcaagcaccgttcagttcaattccttatttggcatggtgacttataaaccgaagtacatt
gagcaacagtatgggcagtcatcctctaaggccaactttgttatcgggctcatcaatata
cctgcagtggcctttggaatattctctggggggatagtcatgaaaaaattcagaatcagt
gtgtgtggagccgcaaagctctacttgggatcatctgtccttgggtacctcctattcctt
tccctttttgcattgggctgtgaaaattctgatgtggcaggactaacagtctcctaccaa
ggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgcaactcaagatgc
aaatgttcagagacaaaatgggaacccatgtgtggtgcaaatggtattacatacgcatcg
gcttgccttgctggttgtcaaacctccaccgggagtggaaagactactatatttaataac
tgcacctgtgtgggaattgccacctcaaaatcaggaaattcctcaggcatggtgggcaga
tgtcaaaaagataatggatgccccaaaatgtttctgtatttccttgtaatttcagtcatc
acatcctacactttatctctaggtgggatacctggatacatgttgcttctgaggtgcatt
aagccacaacttaagtcttttgccctgggtatctacaccttagcagtaagagttcttgca
ggaatcccagctcccgtatattttggagttttgattgatacttcatgcctcaaatgggga
tttaaaagatgtggaagtagaggatcctgcagattatatgactcaaatgcttttagacac
atgtatctgggactaaccatgatccttggcacaatgtccattttcctaagtattgcagta
cttttcactttaaagaaaaagtatgtttcaaaacacagaagtttcagaaccaagagagaa
agaacaatggtgtctacaagaatcaggaaggaaaactgtacgacgagtgatcatttgcta
caacccagctactggccaggcaaagaaacgcagctttag
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