Globicephala melas (long-finned pilot whale): 115844428
Help
Entry
115844428 CDS
T11080
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115844428 (SOX18)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115844428 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
MlaC
Motif
Other DBs
NCBI-GeneID:
115844428
NCBI-ProteinID:
XP_030697322
LinkDB
All DBs
Position
15:complement(86532339..86534182)
Genome browser
AA seq
386 aa
AA seq
DB search
MQRSPPGYGAQDDPPARRDCAWAPGPGAAAEPRGLPTAPAAPAAPAAPASPPSPPRSPPR
SPEPGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLG
KAWKELSPAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPP
PPSEPFPAATGPARAFRELPPLGADFDGLGLPTPERSPLDGLEAGEAAFFPPPAAPEDCA
LRAFRAPYGPAELPRDPGGCFGAPSAEALRTAPAPAAPLCGLYYGAPGVPGPGPYPGPLS
PPPEAPPLEGAEPLGPAADLWADVDLTEFDQYLNCGRTRPDAAGLPYHVALAKLGPRAMS
CPEESSLIAALSDASSAVYYSACISG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacgacccgcccgcccgccgcgactgt
gcatgggccccgggccccggggccgccgctgagccgcgtggcctccccaccgcccccgcc
gcgcccgccgcgcccgccgcgccagcctcgccgcccagcccgccacgcagcccgccgcgc
agccccgagccggggcgctatggcctcagcccggccggccgcggggagcgccaggcggcc
gacgagtcgcgcatccggcggcccatgaatgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccagacctgcacaacgcggtgctcagcaagatgctgggc
aaggcgtggaaggagctgagcccggcggagaagcggccctttgtggaggaggcggagcgc
ctacgcgtgcagcacttgcgcgaccaccccaactacaagtaccggccgcgccgcaagaag
caggcgcgcaaggcccggcgtctggagcccggcctcctgctcccaggcttggcgccgccg
ccgccgtccgagccctttcccgcagccaccggcccggcccgggccttccgcgagctgccg
ccgctgggcgccgatttcgacggcctggggctgcccacgcccgagcgctcgccgctggac
ggcctggaggcaggcgaggccgccttcttccctccgcccgcggcgcccgaggactgtgcg
ctgcgggccttccgtgcgccctacggccccgccgagctgccccgggacccgggcggctgc
ttcggggcgccctcggccgaggcgctcaggaccgcgcccgcccccgccgcgccgctctgc
ggcctctattacggcgccccgggtgtgcccggcccaggcccctatcccggcccgctgtcg
ccgccgcccgaggccccgccgctggagggcgccgagccgttggggcccgccgccgacctg
tgggccgacgtggacctgaccgagttcgaccagtacctcaactgcggccggactcgcccc
gacgccgccgggctcccgtaccacgtggcactggccaagctgggcccgcgcgccatgtcc
tgcccggaggagagcagcctgatcgccgcgctgtccgacgccagctccgctgtctactac
agcgcctgcatctcaggctag
DBGET
integrated database retrieval system
