Globicephala melas (long-finned pilot whale): 115844509
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Entry
115844509 CDS
T11080
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03022
Basal transcription factors
gmf05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115844509 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
115844509 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115844509 (TAF4)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115844509 (TAF4)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115844509 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
115844509 (TAF4)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115844509 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TMP_3
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
115844509
NCBI-ProteinID:
XP_030697491
LinkDB
All DBs
Position
15:complement(85042503..85114142)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHCAASLVPAGPAAKLSALEA
GASAAAGAGAGAGAAAGACAPGAAAAPEPAAKPAARNGPPGGPGAAQTLNGSAALGNSLR
AAAAPAVSLLHNGPAPAPPPPKPAAATVIQTPPFLGSPPAPAPRAPSPPAPAAPAAPPAP
AAAAPPPAPPAAASLARPPGPPAGPPVAAQNGGSAAPAPAPAPAPAPAPAPVSAPAPAAN
SQPGPAAAPAQVAKADSPKTALQPAPPPPQTLAASCPAGAGAGMILGPTMQGALPAAAAA
GLPPPAPGTPTGLPKGSTSAVTQSLPRTPSATTGGIRATLTPTVLAPRLPQPPQNPTNIQ
NFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQTAMAPRPATPTSAPPVQIST
VQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSTALQRSPGVQPQLVLGGAAQTPSLGTAT
AVQTGTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVRELVQ
SLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPA
SQATTALTAVVLSGSVQRTAGKTAATVTSALQPPVISLAQPTPVGVGKQGQPTPLVIQPP
PKPGALIRPPQVTLTQTPMVALRQPHNRIVLTTPQQIQLNQLQPVPVVKPAVLPGTKALS
TVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRS
CKDETFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNF
SYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQ
KAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPAPGSGVEGSGPGSAVPGSSGVGT
PRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagccgtgccggccgagggcgcgcccgcagcggcgccggagccgccc
cccgcaggtagagcgcggcgcggcctgagcgcgggcggccgccggccgggcccgcgtcct
cactgcgctgcttcgcttgtccccgcagggcccgccgcgaagctgagcgcgctcgaggcc
ggcgcgagcgccgcggccggcgccggggccggggcgggcgccgcggccggggcctgtgcg
ccgggggcagcggccgcgcccgagcccgccgccaagcccgccgcccgcaacggcccgccc
ggcggccccggcgccgcgcaaactttgaatgggagcgccgcgttggggaactcgctccgc
gccgccgccgcacctgctgtcagcctgctccacaacgggcccgcgcccgcgccgccgccg
cccaagcccgccgccgccactgtcatccagacgccgcccttcctcggctccccccccgcg
cccgcgccccgcgccccctcgccccccgcgcccgccgcgcccgccgcgccccccgcgccc
gccgccgctgccccgccgccggcgccgcccgccgccgccagcctggcccggccgcccggc
cccccggccggacccccggtggccgcgcagaacgggggcagcgccgcgcccgcccccgcg
cccgcccccgcgcccgccccggccccagcgcccgtttctgccccggcgcccgccgccaac
agtcagccagggcccgccgccgcgcccgcgcaggtggccaaggccgactcgcccaagact
gcgctgcagccggcgcccccgccgccgcagaccctggcggccagctgcccggccggcgcg
ggggccggcatgatcctcgggccaactatgcaaggggctctgcccgccgccgccgccgcc
ggcctcccaccgccggcccccggtacccccaccgggctgcccaagggctcgaccagcgcg
gtgacccagagcctgcccaggacgccctcggccaccaccggcgggatccgggccacgctg
acgcccacggtcctcgccccacgcctgccgcagccgccgcagaacccgaccaacatccag
aacttccagctgcccccaggtatggtcctcgtgcggagcgagaacgggcagctgttaatg
attcctcagcaggccctggcccagatgcaggcccaggcccacgcccaggcccagcctcag
accgccatggcgccccgcccggccacgcccacaagtgcccctcccgtgcagatctccacc
gtgcaggcacctgggacccccattattgcacggcaggtgaccccaacgaccataatcaag
caagtgtctcaggcccagacgacggtacagcccagcaccgcactgcagcgctctcccggg
gttcagcctcagcttgttctgggtggcgctgcccagacaccctcacttgggacggcgaca
gctgttcagacggggacacctcagcgaacggtcccgggggccaccaccacctccacagcc
gccacggaaactatggagaatgtgaagaaatgtaaaaattttttatctacgctaatcaaa
ctggcttcatctggcaaacagtctacagagacagccgctaacgtgagagagctggtgcag
agcctgctggacggaaaaatcgaagcagaagatttcactagtaggttataccgagaactt
aattcttcacctcaaccttaccttgtgcctttcctgaagaggagcttgcccgccttgaga
cagctgacccccgactccgcggccttcatccagcagagtcagcagcagccgccaccggcc
tcgcaggccaccaccgcgctcacggctgtggtgctcagcggctcggtgcagcgcacggcc
gggaagacggcggccaccgtgaccagcgccctccagccccctgtcatcagcctcgcgcag
cccacgccggtgggcgtcggcaagcaggggcagcccacgccgctggtgatccagccgccg
cccaagcctggagcgctgatccggccgccgcaggtgacgctgacacagacgcccatggtg
gcgctccggcagccccacaaccgcatcgtgctcaccacgccccagcagatccagctgaac
cagctgcagccagtccctgtggtgaaacctgccgtgttacctggaaccaaagctctttct
actgtctcagcacaagcagctgctgcacagaaaaacaagctcaaggagcccgggggaggc
tcgtttagggacgacgatgacatcaatgacgtagcgtcgatggccggcgtgaacctgtcg
gaagaaagtgcgagaatattggctacgaactctgagttagtgggcaccctgacgcggtcc
tgcaaagacgagaccttcctcctcccggcgcctctgcaaagaagaatattggaaataggt
aagaaacacggcataacagagttacacccagacgtggtgagttacgtgtcacacgccacg
caacagaggctgcagaaccttgtagaaaagatatcagaaacggctcagcaaaagaacttc
tcttataaggatgatgacagatacgagcaggcaagtgatgtccgggctcagctcaaattt
tttgaacagcttgatcaaattgagaaacagagaaaggacgaacaggagagagagatcttg
atgcgggcagcaaagtctcggtccagacaagaagatccagagcagttaaggttgaaacag
aaggcaaaggagatgcagcaacaagaactggcacagatgaggcagcgagatgccaacctc
acagcactggctgccatcgggcccaggaaaaagaggaaagtggactctccggcaccggga
tcgggagtagagggctcgggcccaggctcagcggtcccaggcagttccggcgtcggaacc
cccagacagttcacgcgacaaaggatcacgcgggtcaacctcagggacctcatattttgt
ttagaaaatgaacgtgagacaagccattcactgttgctctacaaagcattccttaagtag
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integrated database retrieval system
