KEGG   Globicephala melas (long-finned pilot whale): 115845033
Entry
115845033         CDS       T11080                                 
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1 isoform X1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03040  Spliceosome
gmf05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115845033 (SNRPD1)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    115845033 (SNRPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmf03041]
    115845033 (SNRPD1)
   03032 DNA replication proteins [BR:gmf03032]
    115845033 (SNRPD1)
Spliceosome [BR:gmf03041]
 Complex A
  U1 snRNP components
   Sm proteins
    115845033 (SNRPD1)
  U2 snRNP components
    115845033 (SNRPD1)
 Complex B
  U1 snRNP components
    115845033 (SNRPD1)
  U4/U6.U5 tri-snRNP components
    115845033 (SNRPD1)
 Complex C
  U2 snRNP components
    115845033 (SNRPD1)
DNA replication proteins [BR:gmf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     115845033 (SNRPD1)
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7 Hfq Phage_Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 115845033
NCBI-ProteinID: XP_030698452
LinkDB
Position
13:complement(51111602..51132720)
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagatttttgatgaaattgagtcacgaaactgtaaccattgaattaaag
aatggaacacaggtccatggaacaatcacaggtgtagatgtcagcatgaatacacatctt
aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacactgagtatt
cgaggaaataacattcgatattttattctgccagacagcttacctctggatacacttctc
gtggatgttgaaccaaaggtgaagtctaagaaaagggaagctgttgcaggaagaggccga
ggccgaggaagaggaagaggacgtggccgaggaagaggaagagggggtcctaggcgataa

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