Globicephala melas (long-finned pilot whale): 115845036
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Entry
115845036 CDS
T11080
Symbol
COLEC12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115845036 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115845036 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gmf04091
]
115845036 (COLEC12)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Phagocytosis
Opsonins
115845036 (COLEC12)
Lectins [BR:
gmf04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
115845036 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COLEC12
Collagen
Lectin_C
Filament
ATG17_like
KxDL
SepF
UL45
Alpha-2-MRAP_C
Fez1
DUF7856
Motif
Other DBs
NCBI-GeneID:
115845036
NCBI-ProteinID:
XP_030698465
LinkDB
All DBs
Position
13:complement(51876441..52061958)
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AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVHSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDSVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQ
QLREITEKTSKNRDTLEKLQVSGDALVDQQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSLDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALTKANNDTLEDMNSQLSSFAGQMDNI
TTASQANEQNLKDLQDVHRDAENRTAVKFSQLEERFQLFETDIVNIISNISYTAHYLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGQQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPVGPPGERGGKGSKGLQGPKGSRGSPGKPGPQGPSGDPGPTGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAAVPLALQSEPTA
APEANGCPPHWKNFTDKCYYFSVEKEIFEDAKLSCEDKSSHLIFINTREEQQWIKKQMVG
RENYWIGLTDSEQENEWKWLDGTSLEYKNWKAGQPDNWSHGHGPGEDCAGLIYAGQWNDF
QCEDINNFICEKDRETVPSPAL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacttcgcagaggaggaggaggtgcattccttcggttacaagcggtttggt
attcaggaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagttttctatc
atattgttatacattttgtgtgccttgttaacaatcacagtagccattttgggatacaaa
gttgtagagaaaatggacagtgttacaggtggcatggagacatctcgccaaacctatgat
gacaagctcacagcagtggaaagcgacctgaaaaaattaggggaccaaactgggaagaaa
gctctcagcaccaactcagaactctccaccttcaggtcagacattctggatctgcgtcag
caacttcgtgagattacagaaaagactagcaagaacagagatacgctggagaagttacag
gtgagcggggatgcgctggtggaccagcagagtcaactgaaagaaactttggagaataac
tccttcctcatcaccactgtaaacaaaaccctccaggcatataacggctatgtcacaaat
ctgcagcaagacacgagtgtgcttcagggcaacctgcagagccagatgtattctcacaac
gtggtcatcatgaacctcaacaacctgaacctgacccaggtgcagcaaaggaacctcatc
acaaatctgcagcgctctttggatgacacaagccaggcaatccagcgaatcaagaatgac
ttccagaacctgcagcaggttttccttcaagccaagaaggacacggattggctgaaggag
aaagtgcagagcctgcagacgctggctgccaataactctgccttgaccaaagccaacaat
gacaccctggaggacatgaacagccagctcagctcctttgcagggcagatggacaacatc
actacggcctcccaagccaatgagcagaacctgaaagatctgcaggatgtacacagggat
gcagagaacagaacggctgtcaagttcagccagctggaggagcgcttccagctctttgag
accgacattgtgaacatcattagcaacattagctacacggcccactacctacggacactg
accagcaacctgaatgaagtcaggaccacgtgcacggatacgctgaccaaacacacggat
gatctgacctccttgaataacacactggccaacatccgtttggattctgtttctctcagg
atgcaacaagatttgatgaggtcgaggttggacactgaagtggccaacttatcagtgatt
atggaagaaatgaagctggtggactccaagcatggtcagctcatcaagaattttacaata
ctacaaggtcctcctggccccaggggtccgaaaggtgacagaggacagcagggacccccg
ggtcccactggcaacaagggacagaaaggagagaagggggagcctggccctcccggcccg
gccggtgagaggggcccgatcgggccggtcggcccccctggagagcgtggcggcaaaggc
tccaaaggcctgcagggccccaaaggctcccgcgggtcccccgggaagcccggccctcag
ggccccagtggggacccaggccccaccggcccaccaggcaaggacggactcccgggcccc
cagggcccccccggcttccagggactgcagggcaccgtgggggagcctggggtgcccggg
ccgaggggtctgccgggcttgcctggggtgccgggcatgccgggtcccaagggccccccc
ggtcccccgggcccatcaggggcggcggtgcccctggccctgcagagcgagccaactgca
gcacccgaggccaacggctgcccgcctcactggaagaacttcacagacaaatgctactat
ttttcggttgaaaaagaaatttttgaggatgcaaaactttcctgtgaagacaagtcttca
catctcattttcataaacacaagagaggaacagcaatggatcaaaaagcagatggtaggg
agagagaactactggatcggcctcacagactcagagcaggaaaacgaatggaagtggctg
gatgggacatctctagagtataaaaattggaaagctggacagccagataactggagtcat
ggccatgggcctggagaagactgtgctgggctgatttatgctgggcagtggaacgacttc
caatgtgaggacatcaataacttcatttgcgaaaaagacagggagacagtaccatcacct
gcattataa
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