Globicephala melas (long-finned pilot whale): 115845104
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Entry
115845104 CDS
T11080
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115845104 (SEMA6D)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115845104
NCBI-ProteinID:
XP_060150287
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Position
2:complement(86759138..87338379)
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AA seq
1086 aa
AA seq
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MRFFLLCAYMLLLMISQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSV
TDIIQINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRIRYR
LTAIAVDHSAGPHQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
NEEDRRVISLQLDKVHHALYVAFSSCVIRIPLSRCERYASCKKSCIASRDPYCGWLSPGA
CGQVTPGMLLLTEDFFAFHNHSAGGFEQDTEYGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVTTMASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRRNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPSGDTKSMVMDQRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLSSPNGVLLSRQPSMNRGGYMPTPAGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctgctttgtgcctacatgctgcttctgatgatttcccagctgagagca
gtcagctttcctgaagacgatgaaccccttaatactgttgactaccactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcacagcataggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacggta
aacttaaatgaaatccccaaaacagaagtaataccaaacaagaaactgacatggcggtca
agacaacaggatcgagaaaactgtgctatgaaaggcaagcataaagatgaatgccacaac
tttattaaagtgtttgttccgagaaacgacgagatggtttttgtttgtggcaccaatgct
tttaatcccatgtgtagatactataggttgaataccttagagtatgatggggaagaaatt
agtggcttggcaaggtgcccatttgatgccagacaaaccaatgttgccctttttgccgat
gggaagctgtattctgccacagtggctgacttcctggccagtgatgccgttatttaccga
agcatgggcgatggatctgcccttcgtactataaaatatgattccaaatggatcaaagag
ccacactttcttcatgccatagaatatggaaactatgtctatttcttcttccgagaaatt
gctgtcgaacataataatttaggcaaggctgtatattcccgtgtggcccgcatatgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacttcatttctgaaggct
cgtcttaactgttctgtccccggagattcctttttctactttgatgttctgcagtctgtc
acagacataatacaaatcaatggcgtccccactgtggtcggggtgtttaccacacagctc
aacagcattcctggttctgctgtctgtgcatttagcatggatgacattgaaaaagtattc
agaggacggtttaaagaacagaaaactccagattctgtttggacagcagtccctgaagac
aaagtaccgaagccaaggcccggctgttgtgcaaagcacgggcttgctgaagcttataaa
acctccatcgatttcccggatgaaaccctgtcgttcattaaatcccaccccctgatggac
tctgccgtcccacccattgccgacgagccctggttcacaaagactcggatcaggtacaga
ctgacggccatcgccgtcgaccattctgcgggaccccaccaaaactacacagtcatcttt
gttggctcggaagctggcatggtacttaaagttttggcaaaaaccagtcctttctctttg
aatgacagcgtgttactggaagagattgaagcgtacaaccatgcaaagtgcaatgctgag
aatgaggaggacagaagggtcatctcactccagttggataaagttcatcatgctttatac
gtggcgttctctagctgtgttatccgcatccccctcagtcgctgtgagcgttacgcatca
tgtaaaaagtcttgtattgcatctcgagacccgtactgtggctggttaagcccaggggcc
tgtggtcaagtgaccccagggatgctgctgttaactgaagacttctttgctttccataac
cacagcgctggaggatttgaacaggacacggaatatggcaacacagcccatctaggggac
tgccatgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttaccacaatggcaagtatcccagaaattaca
cctaaagtgattgatacctggagacctaaactgaccagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatcctttatcaggtatcccaaagggtgtacga
tgggaagtccagtctggagagtccaaccagatggtccacatgaatgtcctcatcacctgt
gtctttgcggcttttgtcttgggtgcattcattgcaggtgtggcagtgtactgctatcgt
gacatgtttgttcggagaaacagaaagatccataaagatgcagaatctgcccagtcgtgc
acggactccagtggaagttttgccaagctgaatggtctctttgacagcccagtcaaggaa
tatcaacagaatatagattctcccaaattgtatagtaacctgctgaccagtcggaaagag
ctgccacccagtggagatacgaaatccatggtcatggaccagcgaggccaacctcccgag
ctggctgctctcccgacacctgagtctacacctgtgcttcaccagaagaccctgcaggcc
atgaagagccactcagacaaggcccacggccatggggcttcaaggaaggaaacgccccag
ttttttccttctagtcctccaccgcattccccactaagtcatggacatatccccagtgcc
attgtccttcctaatgctacccatgactacaacacatctttctcaaactccaacgctcac
aaagctgaaaagaaacttcagaacattgaccaccctcttacaaagtcatccagtaaaagg
gatcaccggcgttctgtggattccagaaacaccctcaacgatctcctgaagcatctaaat
gacccaaatagtaaccccaaagccatcatgggagacatccaaatggcccaccagacccta
atgctggatcccgtgggacctatgtctgaggtcccgcccaaggtccctaaccgcgaggca
tcactctactctcctccctcgactctccccagaaatagcccaaccaagcgagtggacgtc
cccaccactcctggcgtcccaatgacttctctggaaagacaaaggggttatcataaaaat
tcctcccagaggcactctatatctgctatgcctaaaaacttaagttcaccaaatggtgtt
ttgttatctagacagcctagtatgaaccgtggaggctacatgcccacccccgcaggggcg
aaggtggactatattcagggaacgccggtgagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcacccttcccaggacgggactaaagaggacaccgtca
ttaaaacctgatgtaccaccaaagccttcatttgttccccaaaccccatctgtcagacca
ctgaacaaatatacttactag
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