Globicephala melas (long-finned pilot whale): 115845179
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Entry
115845179 CDS
T11080
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmf03016
]
115845179 (LCMT2)
Enzymes [BR:
gmf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
115845179 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
115845179 (LCMT2)
Transfer RNA biogenesis [BR:
gmf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115845179 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
115845179
NCBI-ProteinID:
XP_030698745
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All DBs
Position
2:90755896..90758994
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AA seq
686 aa
AA seq
DB search
MGPRSRERRAGAVQSTNDSSAVSKTSLAARGYVHDAFAALLVPGTARRAPLIHRGYYVRA
RAVRHCVRAFLKGTCAVPGAPRAQILSLGAGSDSLYFRLKTAGRLTRAAVWEVDFPDVAQ
RKAQRIRDTPELCALTGPFQSGDPGYTLCFESSDYCILGLDLRQLQRLDHALGTAGLDAA
APTLLLAEAVLTYLEPDDAAALIAWAAQRFSNALFVVYEQMRPRDAFGEFMQKHFRQLNS
PLHGLDRFPDAEAQQQRFLQAGWTACRAMDMNEFYRCFLPAEERRRVENLETFDEFEEWH
LKCAHYFILAASLGDALSQTLVFPPSETFPRIDPASPSGVFPASIVTGDSQGPDLKRYGH
ASVLLSPGLILSAGGFGEQEGRHCRVRKFHLLSRYCDFEWKGNQICSWGAGAQWDGRLYH
TMTRLSDTQVLVLGGRLSPVTPALGILQLLFCKSEDNNPEDLNVTVTKVGPEEDSTLSCW
RHSTTEVSYENQRYLFVYGGRSVAEPVLSDWHFLHVGTMAWVRIPVEGEVPEGRHSHSAC
SCQGGALIAGGLGASEEPLSSVLFLKPISCGFIWESIAIQPPITPRYSHTAHVVNGKLLL
VGGVWIHSSSVPGVTVIDLSTGLSFEYQIDTTCVPWPLMLHNHTSILLPEEQQLLLLGGG
GNCFSFGTYFNPCTVALDLSSLSARQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcggagccgcgagcgtcgggccggggcagtgcagagcaccaacgacagcagc
gccgtcagcaagacctccctggctgcgcgcgggtacgtgcacgacgccttcgccgccttg
ctagttccagggaccgcgcgccgcgcgccgctcatccaccgcggctactacgtccgcgca
cgcgccgtgcggcactgcgtgcgcgccttcctgaaggggacgtgcgcggtccccggcgcg
cctcgcgcccagatcctgtcgctcggcgctggctcggactcgctgtattttcgcctcaaa
actgcgggccgcctgacccgggctgcggtctgggaggtagattttccggacgtggcacag
cgcaaagcgcagaggattcgagatacgccggaactgtgtgcgttaaccgggcctttccag
agcggggaccccgggtacacgttgtgctttgagagctcggactactgcatcctgggcctg
gacctgcggcagcttcagcgattggaccacgccctgggcaccgcgggccttgacgcagcc
gcaccgactcttctcctggctgaggccgtgctgacctacctcgagccggatgatgccgcg
gccctcatcgcctgggccgcccagcgtttttctaatgcccttttcgtcgtctacgagcag
atgaggccgcgtgacgcctttggcgagttcatgcaaaaacattttcggcagctgaattct
cccctgcatggcctggaccgctttcccgacgcggaagcccagcagcagcgcttccttcag
gccggctggaccgcctgccgtgccatggacatgaatgagttctatcgctgctttcttccc
gcagaagaacgccggcgcgtggaaaatctcgaaactttcgacgagtttgaggagtggcat
ctgaagtgcgcccactatttcattctggccgcttctctgggagacgccctctcccaaact
ctggtgtttccaccctcagagacgtttcctcggatagatcctgcttccccttcaggagtc
ttccctgccagtatagtcactggtgatagccagggcccagaccttaagagatatgggcac
gcctcggtccttttgagcccaggtcttattctcagtgctggaggatttggagagcaggag
gggcgacattgccgagtgagaaagtttcacttgctctcaagatactgtgactttgaatgg
aaaggcaaccaaatatgcagttggggagctggagctcagtgggatggacgcctttatcac
accatgacaagactttcagatactcaggttctggttctgggagggagactgtccccagta
actccagccttggggattctccagcttcttttttgcaagagtgaggataataaccctgag
gacctaaatgtcacagtcacaaaggtcggcccagaagaagattccactttgtcatgttgg
cgccactcgacaacagaagtgtcctatgagaatcagagatatttgtttgtgtatgggggc
cgcagtgtggccgaacctgtactaagtgactggcatttcctacatgtggggacaatggct
tgggtcaggatcccagtggagggagaagtacctgaaggtcggcattcccacagtgcctgc
agctgtcaagggggagccctcattgctggaggtctgggtgcttctgaggaaccgttaagc
tctgtactctttctgaaaccaatctcttgtggattcatctgggaatcaatagccatccag
cctcccattaccccaaggtactcccacacagctcatgtggtcaatgggaagcttttgttg
gttggaggggtctggattcattcctcctcagttcctggagtgactgttattgatctgtct
acaggactgagcttcgagtatcagattgacacaacatgtgtgccatggccgttaatgtta
cacaatcataccagcattctccttcctgaagagcaacagctcctgctccttggaggtggt
gggaactgcttttcctttggtacctacttcaacccctgtacagtggcattagacctttct
tccttaagtgctaggcagtaa
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