Globicephala melas (long-finned pilot whale): 115845284
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Entry
115845284 CDS
T11080
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04140
Autophagy - animal
gmf04148
Efferocytosis
gmf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115845284 (VPS18)
04148 Efferocytosis
115845284 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115845284 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115845284 (VPS18)
Membrane trafficking [BR:
gmf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115845284 (VPS18)
Hops complex
115845284 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115845284
NCBI-ProteinID:
XP_030698917
LinkDB
All DBs
Position
2:complement(92861578..92870404)
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTRQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYQVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHHACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctctcccgctcggccgtcttgcagccc
ggctgccccagcgtcggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaggcagcgcattgactttaccccttctgagcgtatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ttaggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccctactggctctcacctgctgattgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaagttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggtactgagagcagcacaggccccatc
ctggtcggcactgcccaaggtcagatctttgaagcagagctctcggccagcgagggtggg
cttttcggccctgccccggatctctacttccgtccgttgtatgtgctaaacgaagaaggg
ggcccagcacctgtgtgctccctcgaggcggagcggggccctgaagggcgtgggtttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagcagccgagggagctgag
gcccagggcttctcagggctctttgctgcctacactgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggccttctacacccccaagttgcgctctgcg
ccccgggccttcgcttggatgatgggggatggcgtgttgtatggctcgttggactgcggg
cgtcccgactccctgctgagcgaggagcgggtctgggagtacccagagggggtgggtcct
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcggtgtgcacgctgacggggcaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacaggccacctgtgggcc
cacaccgagcgggccgtcttccgctaccaggtacagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacggtcctggcccgggaggccgacttctgcttccgccagcatcgttacctg
gagagtgcccgctgctacgccctgactcagagctactttgaggagattgccctcaagttc
ttggaggcccaccaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgctgagcgcacccaggccacgctgcttaccgcctggctgacggagctctacctg
agccgactcggggccctgcagggtgaccctgaggccctgaacctctaccgggaaacccgg
gagcgtttccgcgccttcctaagcagcccccgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgcttgccagccacggggacacagagcacatggtatacttcgct
gtgatcatgcaggactacgagcgcgtggtggcataccactgccagcatgaggcctacgag
gaggccctggctgtgctggcccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatccctcgccagctggtggacgcctggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgtactgggcgagactgag
caggccattcacaattacctgctgtcgctctatgcccgaggccagccagcctcgctgctg
gcctacctcgagcaggccggggccagcccacaccgggtacattatgacctcaagtacgcg
ctgcggctctgtgctgagcatggccaccaccatgcttgcgtccatgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggacgtggacctggccaagcag
tgtgctgacctgcccgaggaagatgaggagctacgcaagaagctgtggctgaagattgct
cggcatgtggtgcaggaggaggaggatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggacgtgctgcctttcttccctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctgaaggcttacaaccaccacatccaagagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcaccgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccacgctgactgcctgctg
caggccgtgcggcctggcctgccggcctacaagcaggctcggctcgaggagctacagcga
aagctgggcgctgctccaccccctgccaagggctctgcccgggctaaggaggccgagggg
ggcgctgccaccggggggcccagccgggaacagctcaaggctgacctggatgaactggtg
gccgctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gaccctcagcgctacgaggaggagcacctcagttggttgtag
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