Globicephala melas (long-finned pilot whale): 115845548
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Entry
115845548 CDS
T11080
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X2
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115845548 (CHD6)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115845548 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
115845548
NCBI-ProteinID:
XP_030699441
LinkDB
All DBs
Position
15:complement(68145915..68354547)
Genome browser
AA seq
2720 aa
AA seq
DB search
MIMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDHSTDQEDKTEDVARPCLPQKD
LHTAEEDAETLFPRKTTSHNGTEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEPRKAKEPRKVKEPKEPKQKDGAKKVRKPREASGPKEAKEKRSGPDSAARTK
SKKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEVKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDCVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNTDKEDNTEDKVDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGSQGYWVQEEMFRRSSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFH
SFLAMCRHVCRLPAWKDGGPPDPSICVEPITEERAARTLYRIELLRKVREQVLQCPQLHE
RLQLCRPSLSLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDPQAPGSLCCLYQTNSKLYESLAYTQMSRTSESLENDPENLVKIEGRDDHLGPLRGSLS
DMTCENFISKVQDVISITHDESLLPESLESMMYGKKALSQEPVSFQESPGTNTESRQDAV
ALATSRDGNFQPGGHEAEIASGPSFMDTLEAGVAQMNIKNGKHLLMSLSQEGELCCSEAG
QRPESLGQLETKCIASPSLDQGNESGFVDMCNLSVYDSKRNLSSDQQLIDLLECKSLESK
LILGRNHSDEEEEEEENEEENLDLAAGTRERPEVSPLTEPTARMAGEKSHSSFLVDEAKK
GSLAARSQHPGPQGAFLPAACQCHCKHMERWTHGLENDQFEVEKPQGYNPDPYKSKANNV
TVGGELTAVPPELFQVKHELLKEPWKESAEGKQGFPTYLEGSELKAEDVDFESKDDYDRD
GNCQSQDYPGKYSEEESKNSTSGIVGDLRDNLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSNQQYEPSAALPTPVLTSGARPRSSLSEPEASEHVFSSGAAL
VAQMQKESFLASVFTKEEQKHRRPYEFEVERDAKTRGLEQFPATHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAATRRRRGRRKHVDGGVDLIFLKEPTLQAGILEVHEDPGPAPLSTSHPPEGPVPA
TSTPEPAPVAGSQAEKAIPSKSLLDWLRQQADCPLEVPGFGANFSDKPKQRRPRCKDPGK
LDVNSLSGEERVPAVPKEPDLRGFLPENKFNHTLPEPVLRDSGPRRRGRRPRSELLKAPA
LVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMPSIPLTGLVGFPASFAAMPTGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNAPMATTCASAVPAPLSSTTKSGTSAAEKTAEDQPSG
RDVKTDTSAEDKPGPSPFSDQAEPPITTSSPVAFNPFLIPGVSPGLIYPSMFVSPGMGMA
LPAMQQARHSEIVGLESQKRMRKKTKGDNPDPSPEPAPGLEREPGGAQSCPESRAPAPPE
RGHAAQAGEGGPQDSNSVTN
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaaatttaaaagttctgaatcac
tccccaatgtctgatgcctccgtcaattttgactacaaatccccctccccgtttgaccac
agcactgatcaggaggacaaaactgaagatgttgcccgtccctgtctgccccagaaggac
ctgcacactgctgaagaggacgctgagacccttttccccaggaaaacgacatcccataac
gggacggaggacagtggaggaggcggcactggcgtgaagaagaaacggaagaaaaaggat
ccaggagagcaagaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgtgaacctagagagccaaaggagcccaggaaggccaaggagcccaggaaggtcaag
gagcccaaggagcccaagcagaaggacggggccaagaaggtgcggaagccccgggaggcc
tcgggccccaaggaggccaaagagaagaggagcggccctgactctgcagccaggacgaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaggacctggacttcaaagtggtggatgatgatggg
gaaaccatcgctgtccttggagccggccggacatctgccctctcagcttctacactggct
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaagaggttcaccccggagaacccccattcgacttggagctgttctacgtc
aagtacaggaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactacgtggaggttgatcgcatc
ttggaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagaaagtacatgggaactggaggaagatgtggatcct
gcgaaagttaaagaattcgaatctctgcaagttctccctgaagttaagcatgtggagcga
cctgcctcagactcctggcagaaacttgagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggctgatgagatgggcctagggaaaaccatccagtccatcacattcctt
tcagaaatattcctcaggggaatccacggccctttcctcatcattgccccgctctccacc
atcactaactgggagcgggagttccggacgtggacagagatgaacgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtatgagatggtgtaccgagatgcacag
ggaaacccactgtcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcattgatgaagcc
cacagattgaagaataggaactgcaaacttctggagggcctgaagctcatggccctggaa
cacaaggtgctgctcacagggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccgtcacagtttccttcagagactgctttcttggaggagtttgga
gatctgaaaacagaggagcaggtgaagaaactgcagtctatcctcaaaccaatgatgctt
cggcggctgaaagatgacgtggaaaagaaccttgctcccaaacaggagacgatcatcgaa
gtagagctgaccaatatccagaagaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggggccaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgtaaccacccctacctgatcaacggggcagaggagaaaattctggag
gacttccggaaaacccacagccctgatgcccccgactttcagctgcaggccatgattcag
gcagcagggaagctggtgctgattgataaactgctccctaagctgattgctggcggccac
aaagtactcatcttctcccagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcattacacggaactcctacgagcgggaaatgtttgacaag
gccagcctgaagctgggtctggacaaggctgtccttcaggacatcaaccgaaaaggcagc
acgaatggagtacagcagctttcaaaaatggaggtagaggacttgctccggaaaggtgct
tatggtgccttaatggatgaggaagacgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatccact
tttgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gaaagcttagtgatcgaccgcccgcgcgtgaggaagcagaccaaacactacaactctttt
gaggaggatgagctcatggagttttcagagttggacagtgactctgatgagaggcccacg
aggtccaggcgcctcaatgacaaaaccagacgctacctccgagccgagtgcttccgggtg
gagaagaacctgctcatctttggctggggccggtggaaggacattctgacccatggacga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgggccctgctggtgtac
tgtgtcaagcactacaagggggacgagaagatcaagagtttcatttgggaactgatcacg
cctaccaaagatgggcaggcccagaccctccagaaccactcagggttgtccgctccagtc
cccagagggaggaaggggaagaaaacgaagaaccagctgctgctcccggagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttgcacgatgatggctacaagaag
cacctcaaacagcactgcaacaaggtactactgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagcggataaagcatttgaaggaactccggccagggagctg
gacgtgcctctgcccgacatcgactgcgtggagatcccagtggactggtgggatgccgag
gccgacaagtcgcttctgattggcgtgttcaagcacggttacgagaggtacaatgccatg
agagcagacccagcactttgcttcctggagaaggttgggatgccagacgagaagtccctt
tctgcagagcagggtgttacagatgggacctcagacattcccgaaagaggcaacacagat
aaagaagacaatacagaagacaaagtagatggcctccagaaacaaatggagagttccagt
gatggaggtgatggcatttttggtgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagtttcgtctgcactcacagctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccgacctgaaatcctggga
ccaggaagccagggatactgggtccaggaagagatgttccggaggtcctcagagatggat
ctcatcaacaaggaagcccaaaagaggtggactaggagagagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagaaaagaaaacctttgactggacgcag
tttcgcatcatttcccgtttggacaagaagtcggacgagagcctggagcactatttccat
agcttcttggccatgtgccggcacgtctgtcgtctgccagcctggaaggatggtggcccc
ccagatcccagcatctgcgttgaacccatcactgaagagcgggccgcgagaaccctgtac
cgcattgaactgttgcggaaggtccgggagcaagtgctgcagtgtcctcagctgcacgag
cgccttcagctctgcaggcccagcctctccctccccgtctggtgggagtgtggaaagcac
gatcgggacctgttgatcggcactgccaagcacgggctgaaccgcaccgactactacatc
atgaccgacccccagctgtccttcctggacgcctacagaaactatgcccaacacaaaaga
accgacccccaggctccagggagtctctgttgcctttaccagaccaactccaaactgtat
gaatctcttgcgtatactcaaatgagcaggacttccgagtcccttgaaaatgatcctgag
aatctagtgaaaatagaaggtagggatgatcatcttggtccacttcggggcagcttatct
gacatgacttgtgaaaactttatttctaaagttcaggatgtcatttccatcacccatgat
gagagtctactgcctgagtccttggagagcatgatgtatggtaagaaagcactaagccag
gagccagtctcttttcaggagagcccaggtaccaatactgagtccagacaagatgccgtg
gctctcgcaacaagcagagatggcaacttccagcctggtggccacgaggcagaaatagcc
tcaggcccctcttttatggatacattagaagcaggagtagctcaaatgaacattaaaaat
ggaaaacatttgctgatgtctctttcacaggaaggggaactctgctgcagcgaggcaggg
cagagacctgaaagccttgggcagctggaaaccaaatgcatagcctccccttccttggac
caaggaaatgagagcgggtttgttgacatgtgcaatctgagtgtctatgactccaaaaga
aacctgtcatcagatcagcagttaattgatttattagaatgcaaaagtttagaaagtaaa
ttgattttgggtcggaaccacagtgatgaggaggaagaagaggaggaaaatgaggaggaa
aacctagacctggccgcaggcacgcgggaaaggccagaggtgtcgcctcttaccgagccc
actgctcgtatggcaggggagaagagccacagcagctttcttgtggacgaagccaagaaa
ggaagcctggcggccagaagccagcatcctggaccgcagggcgcttttcttcccgcagcc
tgtcagtgtcactgcaaacacatggagaggtggactcatggcctcgagaatgaccagttt
gaagtggagaaaccccagggttacaacccagacccatacaaaagcaaagccaataatgtc
acagttgggggcgagctcactgctgttccgccagagctgtttcaggtgaagcatgaactt
ttgaaagaaccctggaaagaaagtgcagaagggaaacaaggtttccctacatatctggaa
gggagtgaactcaaggcggaagacgtggattttgagagtaaagatgattatgatagagac
gggaactgccagagtcaagattatccagggaaatactctgaggaggagagcaagaactcg
acctcgggcatcgtaggggacctcagggacaacctgcaggaggcacgggctcccaccatt
gcacagctgctccaggagaaaaccctctattccttctccgagtggccaaaggatcgcgtg
ataattaaccgcctggataacatctgccatgtggtgttaaaggggaagtggccctccaac
cagcagtatgagccctcggccgcgctgcccacccccgtgttaaccagcggcgctcgtccc
cgcagcagcctttcagagccagaggcatcagaacatgtcttcagcagtggcgcagcgttg
gtggcccagatgcagaaggagagcttcttggcttcggtattcacaaaggaggaacagaag
cacaggcgtccttatgagttcgaggtggagagggacgcaaagacccggggcctggagcag
ttccccgccacccacgggcacccccccatcgtcctcaacggctggcacggagagtcagcg
atagacctctcctgcccatcggaggggtccccgggggccacatcccctttcccagtgagc
gccagcacccctaagattggggctatcggttcacttcagggagcccttggcatggacttg
tctgggattctgcaagccggcctgatccatccagtgactggacagatcgtcaacggaagc
ctcaggagagatgacgctgccaccaggaggcggagagggaggcggaagcatgtagacgga
ggcgtggacctcatctttctgaaggagccgacgctccaggcggggatcttggaggtccac
gaagacccagggccagcccccctgagcacctcacaccctcctgaagggccagtgcctgcc
acttcgaccccggagccggccccggtagccggcagccaggccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggcagactgccccctcgaggtccctggcttt
ggcgcgaatttttcagacaaacccaagcagaggaggccacgctgtaaggatcctggaaaa
ttagacgtcaactccctgagtggggaagagagggttcctgccgtccccaaggagccagac
ctgagggggtttctcccggaaaacaagttcaatcacacccttcctgagcctgttctccga
gactcaggcccccgccggaggggcaggcggccccggagcgagctcctgaaggctcccgcc
ctcgtggcggactccccctccgggatggggcctctcttcatgaatggcctgatcgccggg
atggacctggtcggacttcagaacatgagaaacatgcctagcattcccctcacggggctg
gtggggttcccggccagctttgcagcgatgcccacgggcgaagaggtcaagagcacgttg
agcatgctgcccatggtgctgccggggatggccgccgtgccgcagatgtttggggtcggg
gggctcctcaatgcccccatggccaccacctgcgcctcggctgtgccagcgcctttgtca
agcacaacgaagagtggcacgtcggcggctgaaaagactgcagaagaccagcccagcggc
cgtgatgtcaaaacggacacgtcagccgaagacaagcccggtcctagtccattttccgat
caggccgaacctccaataactacgagtagtcctgtggcttttaacccgttcctcatccca
ggagtgtcccccggactcatttacccatccatgtttgtctcccccggcatgggcatggct
ctgccggccatgcagcaggccagacactcggaaatagtaggtctggagagccagaagagg
atgaggaagaaaacaaaaggggacaacccggaccccagcccagagcctgcacccgggttg
gagagggagccgggcggtgcccagagctgccccgaatccagggcgcccgcgcctccagag
agaggacacgcagcacaggccggtgaagggggcccccaagactctaacagtgtcaccaat
tag
DBGET
integrated database retrieval system
