Globicephala melas (long-finned pilot whale): 115845614
Help
Entry
115845614 CDS
T11080
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04068
FoxO signaling pathway
gmf04110
Cell cycle
gmf04120
Ubiquitin mediated proteolysis
gmf04150
mTOR signaling pathway
gmf05169
Epstein-Barr virus infection
gmf05200
Pathways in cancer
gmf05203
Viral carcinogenesis
gmf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115845614 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115845614 (SKP2)
04150 mTOR signaling pathway
115845614 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115845614 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115845614 (SKP2)
05203 Viral carcinogenesis
115845614 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
115845614 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
115845614 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115845614 (SKP2)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115845614 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
115845614
NCBI-ProteinID:
XP_030699542
LinkDB
All DBs
Position
3:29376857..29450622
Genome browser
AA seq
436 aa
AA seq
DB search
MHAFKTPEPADAMHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDS
ENIPQELLSNLGHPQSPPRKRLKSKGNDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGI
FSCLCLPELLKVSSVCKRWYHLAFDESLWQTLDLTGRNLHPDVVGRLLSRGVVAFRCPRS
FMDQPFVERFSPFRVQHMDLSNSVIDVSTLHGLLSHCSKLQNLSLEGLQLSDPIVNNLAQ
NTNLVRLNLSGCSGFSESALKTLLSSCCRLDELNLSWCYEFTEKHVQVAVAHVSETVTQL
NLSGYRKNLQRSDVSTLVGRCPSLVHLDLSDSVMLKSDCFPEFFQLNYLQHLSLSRCYDI
IPETLLELGEIPTLKTLQVFGIVPDSTLQLLKEALPHLQINCSPFTTIARPTTGNKKNQE
IWGIRCRLTLQKPSCL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatttaaaactcccgaacctgcggacgccatgcacaggaaacacctccaggag
attcccgaccagagtagcaacgttaccaccagcttcacgtggggatgggattctagcaag
acttctgaactgctttcaggcatgggggtctccgccctggagaaggaggaggtggacagt
gagaacatcccccaggaactgctttcaaacctgggccacccgcagagccccccacgaaaa
cggctaaagagcaaagggaatgacaaggactttgtgattgtccgcagacctaagctaaat
cgagagaactttccaggtgtttcatgggactcccttccagacgagctgctcttaggaatc
ttctcctgtctgtgcctccctgaacttctgaaagtctccagtgtttgtaagagatggtat
catctagcgtttgacgagtctctctggcagaccttagacctcacgggcagaaacctccac
ccagatgtggttggtcggctgctgtctcgaggggtggttgccttccgctgcccacgatcg
tttatggaccaaccgtttgttgaacgtttcagcccttttcgtgtacagcacatggacctg
tcgaactcggtgatcgatgtgtctaccctccacggccttctgtctcactgctccaagttg
cagaatctcagtctagaaggcctacagctttcggatcccattgtcaacaatcttgctcag
aacacaaatttggtgcgattaaacctttctgggtgttctggattctctgaatctgccctg
aagactttgctgagcagctgttgcagattggatgaactgaacctctcctggtgctatgaa
ttcactgaaaagcatgtgcaggtggctgtcgcacacgtgtcagagactgtcacccagctg
aatctcagcgggtaccgaaagaatctgcagagatcggatgtctctaccttagttggaaga
tgtcccagtcttgtccacctagacttaagcgacagtgtcatgctgaaaagtgactgcttt
ccggaatttttccagctcaactacctccaacacctatcactcagtcggtgctatgacata
atacctgaaactttacttgaactcggagaaattcccacactaaaaacactacaagtcttt
ggaatcgtgccagacagtacccttcaactattaaaggaagcccttcctcatctacaaatt
aattgttcccctttcaccaccatcgctaggccaaccactggcaacaaaaagaaccaggag
atatggggcatcagatgccgactgacactgcagaagcccagttgtctatga
DBGET
integrated database retrieval system
