Globicephala melas (long-finned pilot whale): 115845923
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Entry
115845923 CDS
T11080
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115845923 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmf03041
]
115845923 (AQR)
Spliceosome [BR:
gmf03041
]
Complex B
Other components
Prp19-related factors
115845923 (AQR)
Complex C
115845923 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
Parvo_NS1
AAA_16
UvrD_C_2
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
115845923
NCBI-ProteinID:
XP_030700129
LinkDB
All DBs
Position
2:98519758..98640877
Genome browser
AA seq
1485 aa
AA seq
DB search
MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDDFP
FFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSE
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
TRESLIKFFGPLSSNTLHQVASYLCLLPTLPKGEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPSIGENWPTRVRADVS
IHLNVRDHIRDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFVEQVGLVYVRGCEVQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFFS
IEHLKTSFPGHNVKVTVDDPALQIPPFRITFPVRNGKGKKRKDAEKEDEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPD
VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
QTLLQLPPAMLEEGEEVQSQETELETEEEATPAQADIVPSLTDASSSQETSASQTETIPS
HTGDSSSSEAIPTESEITATVAEPVAVPAENNTPQDATSAPRETK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgctcagcccaagaaaatcgtggcccctacggtgtcccagatcaacgcg
gagttcgtgacccagttagcttgtaaatactgggctccccatatcaagaaaaaatcacct
tttgacataaaggtgattgaagatatatatgagaaagaaattgtcaaatcaaggtttgcc
atcagaaagataatgctcttggaatttagccagtatcttgaaaattacctctggatgaat
tattctccagaagtgtccagcaaagcctatttaatgtcaatctgctgtatggtgaatgag
aagttcagagaaaatgtccctgcatgggagacttttaagaagaagccagatgacttccca
ttctttttcaagtgtatcttgaaagcggcattagctgaaactgatggtgaattttcactc
catgaacagacagtcttactgctttttcttgatcattgcttcaatagtttggaagtagac
ttgatacggagtcaagtgcagcagcttatctcccttccaatgtggatgggcttacagcct
gcacgattggaattagaattaaaaaagacacctaaactaagaaaattctggaacttgatt
aaaaagaatgatgaaaagatggatccagaagcaagagaacaagcctatcaagaaagaaga
tttctttcacagctcatccagaagtttatctctgtactgaaatcagttccactttctgaa
cctgtcactatggacaaagttcattattgtgaaagatttattgaacttatgattgatcta
gaggccctactccccacaagacgctggtttaataccatcctggatgactcccaccttttg
gttcactgttacctttccaatcttgttcgtagagaagaggatggccatcttttttcccag
cttttggacatgcttaagttctatactggttttgagattaatgatcagactggaaatgct
ctgaccgagaatgagatgactacgattcactatgatagaattacttctctacagagagct
gcttttgcacatttccctgagctctatgattttgccctctcaaatgttgcagaagtagat
actcgggaatccttgatcaagttttttggacctcttagttcaaatacactccaccaggtg
gcatcatacctctgcttgttaccaactcttcctaaaggtgaagacacgacttttgataaa
gaatttcttctagaattgttggtatctcgtcatgagcgtcgaatttctcagattcagcag
ttgaaccagatgcctttgtatccaaccgagaaaatcatatgggatgaaaatattgtccca
actgagtactattctggggaaggttgtcttgctcttcccaagttgaatttgcagtttttg
actcttcatgattacctcctaaggaactttaatctcttccgcttagaatcaacttatgaa
attaggcaggacatcgaggatagtgtcagcagaatgaagccatggcagtctgagtatggc
ggggtggtattcggtggctgggcgcgaatggcccagcccatcgtggcgttcaccgtggtg
gaggttgccaaacccagcataggcgagaactggccaacccgggttcgcgcagatgtcagc
atccatctgaacgtcagagaccacatcagagatgagtgggaaggacttcggaagcatgat
gtatgctttttaattactgtacgtcccacaaaaccttatggtaccaagtttgaccggagg
agaccttttgttgagcaggttggcctggtttacgtcagaggctgtgaggtccagggcatg
ctggacgataaagggcgtgtcattgaagacggacctgaacccagacccaatcttagagga
gaatcaaggacatttagagtgtttttggatccaaaccagtatcaacaagatatgaccaat
acgatacaaaatggagcagaagatgtatatgaaactttcaatataataatgaggagaaaa
ccaaaggaaaataactttaaggctgtgctggagactattcggaacctgatgaatactgat
tgtgtggtacctgactggctgcatgacatcattttaggttatggggatccaagtagtgca
cattattccaaaatgcccaatcagatcgccacccttgatttcaatgatacatttttctcc
attgagcatttaaaaaccagctttcctggtcataatgttaaagtaactgtggatgaccca
gctctacagataccccctttcaggataacttttccagtaagaaatggaaaggggaagaaa
aggaaagatgcagagaaggaagatgaagacactgaagaggcaaaaaccttaattgttgaa
cctcatgttattcctaatagaggtccttatccttacaaccagcccaaacggaatacaatt
cagttcactcatacacagatagaggccatccgtgctggaatgcagcctgggctaactatg
gttgtgggcccaccaggtacaggaaaaacagatgtggcagtccaaatcatatccaacatc
taccacaatttcccagagcagaggactctgattgttactcattccaatcaggccctgaac
cagttgtttgagaaaattatggctttagacattgacgagcgtcacctcctgcgtcttggt
catggagaagaagagctggagacggagaaagatttcagcaggtatggaagagttaattat
gtcctagctcgaagaatagaacttttagaagaagtcaaacgattgcagaagagtctaggg
gttccaggagatgcgtcatatacttgtgaaactgcaggctatttcttcttatatcaggta
atgtctcgttgggaagagtatatcagcaaagtgaaaaataaaggtaacacgttgccagat
gttactgaagtctccactttcttcccttttcatgagtactttgcaaatgcccctcaaccc
atttttaaaggccgatcttatgaagaagacatggaaattgctgaaggatgtttcaggcat
attaagaaaatctttactcagcttgaggagtttagagcctccgaactgcttcgaagtgga
ctagacagatctaaataccttttggtgaaagaagccaaaatcattgctatgacctgtact
catgctgccttaaaacgacatgatttagtcaagttaggcttcaagtatgacaacatttta
atggaagaggctgctcagattctggagatagaaacttttatacctcttcttctacagaat
cctcaggatggttttagccgactaaaacgttggattatgattggtgatcatcaccagtta
cctccagtcattaagaacatggcctttcagaagtattcaaacatggagcaatctctcttc
actcgctttgtcagagttggagttcctactgtggacctcgatgcccaagggagggccaga
gcaagcttgtgcaacctctacaactggcgatacaagaatctaggaaacctaccccatgtg
cagctcttgccggagtttagtacagcaaatgctggcttgctttatgacttccagctcatt
aatgttgaagattttcagggagttggagaatctgagcctaatccttacttttatcagaat
cttggagaggcagaatacgtagtggcactttttatgtacatgtgcttacttggttaccct
gctgacaagattagcattctaacaacatataatggacaaaagcatcttattcgtgacatc
atcaatagacgatgcgggagcaatccattgattggaagaccaaataaggtgacaaccgtt
gacagatttcaaggtcaacagaatgattatattcttctttctctagtacgaaccagggca
gtgggccatctgagggatgtccgtcgcttagtggtggccatgtctagagccagacttgga
ctttatatcttcgccagagtatccctcttccaaaactgttttgaactaactccagctttc
agccagctcacagcccgcccacttcatctgcatataattccaacagaacctttcccaacc
agtagaaagaatggagagagaccatctcatgaagtacagataataaagaatatgccccag
atggcaaactttgtatacaacatgtatatgcatttgatacagaccacacatcattatcat
cagactttattacagctaccacctgctatgctagaagaaggtgaagaagttcaaagtcag
gaaacagaattggaaacagaagaagaggccacgcctgctcaagctgacattgtacctagt
ctaacagatgccagctccagtcaagaaacctcagcctctcagactgagaccatccccagt
cacacaggagacagttccagttcagaggccatccctactgaatccgagatcactgctact
gtggcagaacctgtagctgtaccagcggagaataacacccctcaagatgccacatccgcc
cccagagaaaccaagtag
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