Globicephala melas (long-finned pilot whale): 115846141
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Entry
115846141 CDS
T11080
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115846141 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115846141 (DHX36)
03012 Translation factors [BR:
gmf03012
]
115846141 (DHX36)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115846141 (DHX36)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115846141 (DHX36)
Translation factors [BR:
gmf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115846141 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
PhoH
nSTAND3
ATPase
AAA_34
RsgA_GTPase
NPHP3_N
DUF6782
Motif
Other DBs
NCBI-GeneID:
115846141
NCBI-ProteinID:
XP_030700496
LinkDB
All DBs
Position
4:112297493..112358224
Genome browser
AA seq
1012 aa
AA seq
DB search
MSYDYHQNWGRDGGGRDGGSRSSGGGYGGSYGGGHGGNRGSGGGGGGGGGGRGGRGRHPG
HLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQIS
WFAPEDHGYGTEAPAENKPNSVKKVEDQEKKLINQEKRPFRIRDKYIDRDSEYLLQENEP
DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGCGK
TTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRL
QSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNY
RPDLKIVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKTRYVPEQKEHRS
QFKRGFMQGHVNRQEKEEKEAIYKERWPGYVRELRKRYSPSTIDVIGMMDDDKVDLNLIA
ALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQV
FKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANA
KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS
RLMDPPSNEAVLLSIKHLMELNALDKQEELTSLGVHLARLPVEPHIGKMILFGALFCCLD
PVLTIAASLSFRDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEAARQRGFRY
EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVIC
AGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSS
IYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDIL
LQEKIESPHPVDWKDTKSRDCAVLSAIIDLLKTQEKATPRNLPPRFQDGYYS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggggccgcgatggcgggtcc
cgcagctccggcgggggttacggaggaagctatggagggggccacggagggaatcgaggc
tccggaggtggcggcggcggaggagggggtggtcgaggcggccgaggccgacatcccggg
cacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaaggccagaagaacaag
gaagcggagaggcaggagagagctgtggtacatatggatgaacgtcgagaagaacaaatt
gtgcagctgctacattctgtgcaggctaagaatgataaagattcggaagcacaaatatcc
tggtttgctcctgaagatcacggatatgggactgaagctcctgctgagaacaaaccaaac
tcagtaaagaaagttgaggatcaggaaaaaaaattgataaatcaagaaaagagaccattt
agaatcagggacaaatatattgaccgcgattctgaatatctcttgcaagaaaatgaacca
gatgtaactttagaccaacaattattggaagatttacaaaagaaaaaaactgaccttcgg
tatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaattg
gtaaatatgatcgataaccatcaggtaacagtagtaagtggtgaaactggttgtggaaaa
accactcaagttactcagttcattttggataactacattgaaagaggaaaaggatctgca
tgcaggatagtttgtactcagccaagaagaattagtgccatttcagttgcagagagagtg
gctgcagaaagggcagaatcttgtggcaatggtaatagtaccggataccaaattcgtctc
cagagtcggttgccaaggaaacagggttctatcttatattgtacgacaggaattatcctt
cagtggcttcagtcagacccgcatttgtccagtgttagtcatatcgtgcttgatgaaatc
catgagagaaatctacagtcagatgttttaatgactgttgttaaagatcttctcaattat
cgacctgacctgaaaatagttttgatgagtgcaacattgaatgctgagaaattttcagaa
tattttggtaactgtccaatgatacatatacctggttttacttttccggttgtggagtat
cttttggaagatataattgaaaaaacaagatatgttccagaacaaaaagaacacagatcc
cagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaagaaaaagaa
gcaatctataaagaacgctggccaggttatgtaagggaattgcgaaaaaggtattctcca
agcactatagatgttataggaatgatggatgatgataaagttgatctgaatttgattgct
gcccttattcgatacattgttttggaagaagaggatggtgcaatattggtctttctacca
ggttgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgtttaaatca
gacaggtttcttattatacccttacattcactgatgcctacagttaaccagacacaggta
tttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaacatagcagagact
agcattaccatagatgatgtagtttatgtaatagatggaggaaaaataaaggagacacac
tttgacacacagaacaacatcagtacaatgtctgctgagtgggttagtaaagctaatgct
aaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctgtataat
ggtcttagagcaagccttctagatgactatcaactgccagaaattttgagaacgcctttg
gaagaactttgtttacaaataaagattttaaggctaggtggaattgcttactttctgagt
aggctaatggatccaccatcgaatgaagcagtgttactttccataaaacacctgatggaa
ctgaacgctttggataaacaagaagaattgacatctcttggagtccacttagcacgatta
ccagttgagccacacattggaaaaatgattctttttggagctctgttctgttgcctcgac
ccggtgctcaccattgctgctagtcttagcttcagagatccctttgtgattccactggga
aaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagtgatcac
ctgacagttgtgaatgcatttgagggctgggaagcagctagacaacgtggtttcagatat
gaaaaagactattgctgggaatattttctgtcttcaaacacactgcagatgctgcataac
atgaaagggcagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcct
aaagatccaaaatctaatataaattcagataatgagaagataattaaagctgtcatctgt
gctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatg
gtgaaagtttacacaaaaactgatggactagttgctattcatcccaaatccgttaatgtg
gagcaaacagagtttcactacaactggcttatctatcacctgaagatgagaacaagtagt
atatacttgtatgactgcacagaagtttctccatactgtctcttgttctttggaggtgat
atttccattcagaaggataatgatcaggagactattgctgtagatgaatggattatcttt
cagtctccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatatcctt
ctgcaagagaagattgaaagtccccatcctgtagactggaaggacactaaatccagagac
tgtgcagtactctcagctattatagacttgctcaaaacacaggaaaaagcaactcccagg
aacttgccaccacgatttcaggatggatattacagctga
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