Globicephala melas (long-finned pilot whale): 115846175
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Entry
115846175 CDS
T11080
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115846175 (SOX3)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115846175 (SOX3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115846175
NCBI-ProteinID:
XP_030700528
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Position
X:complement(19707679..19709781)
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AA seq
449 aa
AA seq
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MRPARDNASGASSLQVPADLALSTSARLPFLPDPLAHRPPSAPPTESPGLFTVAAPAPGA
PSPPATLAHLLPAQAMYSLLETELKNPAGPPTPAAGAGGPAAPGGAGKSTANAGGGANAG
GGSGGGASGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGA
DWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAA
AAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPAL
PQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAA
AAAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASP
LPGGRLHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagcccgagacaacgcatcaggtgcgagtagcctgcaggttcccgctgatttg
gcgctgagcacttcggcaagactgcccttcctgcccgacccactggcccaccggccccca
agcgcccctccgacggagtccccaggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcccgccaccctggcgcaccttcttcccgcccaggccatgtacagcctgctg
gagactgaactcaagaaccccgcggggccacccaccccagctgcaggcgcgggcggcccc
gcagccccgggcggtgcaggcaagagtaccgcgaacgcaggcggcggcgcgaacgcaggc
ggcggcagcggcggtggcgcgagcggcggcggcggcggcggcggcggcgggggcagtgac
caggaccgggtgaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgc
aagatggctctggagaaccccaagatgcacaactctgagatcagcaagcgcttgggcgcc
gactggaaactgctgaccgatgccgagaagcggccgttcatcgacgaggccaagcggctg
cgcgccgtgcacatgaaagaatacccggactacaagtaccggccgcgccgcaagaccaag
acgctgctcaagaaggacaagtactccctgcccggcggcctgctgccccccggagccgcg
gccgccgccgccgccgctgccgccgccgccgccgctagcagcccggtgggcgtgggccag
cgcctggacacgtacacacacgtgaacggctgggccaacggcgcgtactcgctggtgcag
gagcagctgggctacgcgcagcccgcgaccatgagcagcccgccgccgccgcccgcgctg
ccgcagatgcaccgctacgacatggccggcctgcagtacagccccatgatgccgcccggc
gcccagagctacatgaacgccgccgccgccgcggctgccgcctcgggctacgggggcatg
gcgccctccgccgccgccgccgccgccgccgcctacgggcagcagccagccaccgccgcc
gccgccgcggccgccgccgccatgagcctgggccccatgggcacggtggtgaagaccgag
cccagctcgccgccgcccgccatcgcgtcgcactcgcagcgcgcgtgcctcggcgacctg
cgcgacatgatcagcatgtacctgccgcccggcggggacgcggctgacgccgcctcgccg
ctgccgggcggccgcctgcacagcgtgcaccagcactaccagggcgccgggactgccgtc
aacggaacggtgccgctgacccacatctga
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