Globicephala melas (long-finned pilot whale): 115846352
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Entry
115846352 CDS
T11080
Symbol
OCLN
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03272
Virion - Hepatitis viruses
gmf04382
Cornified envelope formation
gmf04514
Cell adhesion molecule (CAM) interaction
gmf04530
Tight junction
gmf04670
Leukocyte transendothelial migration
gmf05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115846352 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115846352 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115846352 (OCLN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
115846352 (OCLN)
09158 Development and regeneration
04382 Cornified envelope formation
115846352 (OCLN)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
115846352 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115846352 (OCLN)
Protein phosphatases and associated proteins [BR:
gmf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115846352 (OCLN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DUF6338
FKBP15
Laminin_II
UPF0182
HBM
DUF5134
DUF4164
GAS
Swi5
TMF_TATA_bd
FapA
APG6_N
Knl1_RWD_C
DUF7307
OmpH
CC_Bre1
DivIC
DUF4200
Motif
Other DBs
NCBI-GeneID:
115846352
NCBI-ProteinID:
XP_030700870
LinkDB
All DBs
Position
3:55334973..55382676
Genome browser
AA seq
522 aa
AA seq
DB search
MSSRPFESPPPYRPDEFKPNHYAPSNDVYGGEMHIRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGTLVGGGIGYPYGGSGFGSYGSGYGYG
YGYGYGYGGGYTDPRAAKGFLLAMAAFCFMAALVIFVTSVIRAEVSRTRRYYLTVIIVSA
VLAVMVFIATIVYILGVNPTAQASGSLYSSQIYALCNQFYTPAAAGVYVDQYLYHYCVVD
PQEAIAIVLAFMVVVAFALIIFFAVKTRRKMDRYDKSNILWDKERIYDEQPPNVEEWVKN
VSAGTQDMPPPLSDYGERVDSPVAYSSNGKVNEKRLYPESSYKTTPVPEVAQELPVTSPV
EDFRQPHYSNSGNLETLSKRAPSKGKAGKSRRSEQDHYETDYTTGGESCDELEEDWIREY
PPITSDQQRQLYKRNFDTGLQEYKSLQAELDEINKELSRLDKELDDYREESEEYMAAADE
YNRLKQVKGSADYKSKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccagaccttttgaaagtccacctccttacagacctgatgaattcaaacccaat
cattatgcaccaagcaatgacgtatatggtggagagatgcacattcgaccaatgctctct
cagccagcgtattctttctacccggaagatgaaattctccacttctacaaatggacctct
cctccaggagtgattcggattctgtctatgcttattatcgtgatgtgcattgccattttt
gcctgtgttgcctccactcttgcctgggacagaggctatggaaccttagtgggaggtggc
attggctacccttatggaggaagtggctttggtagctacggaagtggatatggctatggt
tatggctacggttatggctatggaggaggctatacagatccaagagcggcaaagggattc
ctgctggccatggctgccttttgtttcatggctgcattggtgatatttgttaccagcgtt
ataagagctgaagtatctagaacaagaagatattatttgactgtgataatagtgagtgct
gtcctggccgttatggtgtttattgccacaattgtctatatattgggagtcaacccaact
gcccaggcatctgggtctctctacagttcacaaatatatgccctctgcaaccagttttat
acacctgcagctgctggagtctatgtggatcaatatttgtatcactactgtgtggtggat
ccccaggaggccattgccattgtgctggcgtttatggttgttgtggcttttgctttaata
attttctttgctgtgaaaactcgaagaaagatggaccggtatgacaagtcaaatattttg
tgggacaaggaacgaatttatgatgagcagccccccaatgtcgaagagtgggttaaaaac
gtttctgcaggcacacaagacatgcctcctcccctttctgactacggggagagagtggac
agccccgtggcctactcctccaatggtaaagtgaacgagaagcgactgtatccagagtct
tcctataaaacaacaccggtgcctgaagtggctcaggagctgccagtgacttcacctgtg
gaggacttccggcagcctcattacagcaacagtggtaacttggagacgctttcaaaaagg
gctccctcgaagggcaaggcaggaaagtcgaggagatcagagcaagaccactatgaaaca
gactacacgacgggcggcgagtcctgtgatgagctggaggaggactggatcagggaatat
ccacctatcacttcagatcaacaaagacaactctacaagaggaattttgacactggcctg
caggaatacaagagcttacaagcagaacttgatgagatcaataaagaactctctcgtctg
gataaagaactggatgactatagagaagaaagtgaagagtatatggctgctgctgatgaa
tacaatagactgaaacaagttaagggatctgcagattacaaaagtaagaggaattattgc
aagcagttgaagagcaaattgtcacacattaagaagatggttggagattatgatcgacgg
aaaacatag
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