Globicephala melas (long-finned pilot whale): 115846534
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Entry
115846534 CDS
T11080
Symbol
PTPN23
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 23 isoform X1
KO
K18040
tyrosine-protein phosphatase non-receptor type 23 [EC:
3.1.3.48
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115846534 (PTPN23)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115846534 (PTPN23)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115846534 (PTPN23)
Protein phosphatases and associated proteins [BR:
gmf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
115846534 (PTPN23)
Cilium and associated proteins [BR:
gmf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115846534 (PTPN23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
Y_phosphatase
ALIX_LYPXL_bnd
PTP-SAK
Y_phosphatase3
Tc-R-P
ORF6C
DSPc
DUF6852
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
115846534
NCBI-ProteinID:
XP_030701158
LinkDB
All DBs
Position
11:complement(40366211..40407853)
Genome browser
AA seq
1630 aa
AA seq
DB search
MEAVPRMPMIWLDLKEAGDFHFQPAVKKFVQKNYGENPEAYNEELKKLELLRQNAVRVPR
DFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVSVTWTEIFSGKSVAHEDIKYEQACILYN
LGALHSMLGAMDKRMSEEGMKVSCTHFQCAAGAFAYLREHFPHAYSVDMSRQILTLNVNL
MLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKL
VQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLAKGQPDTVQDALRF
TMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVKGAPLVKPLPVNPTDPAVTGPDIFTKL
VPMAAHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMQLDPETVDNLDAYSHIPPQ
LMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKMQEAVSQA
GASTAVSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSGPLDQVRAAL
PTPALTPEDKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITASLVTTDHSEIKK
LFEEQLKKYDQLRVYLEQNLAAQDNILRALTEANVQYASVRRVLSELDQKWNSTLQTLVA
SYEAYEDLMKKSQEGKDFYADLESKVAALLERAQSTCQAREAARQQLLDRELKKKPPPRP
TAPKPLLPRREEGEPVEAGDLPEELRSLPPDTFLGAAVPLHFPPGPFPSSAGPGPHYLSG
ALPPGTYSGPAQMLQPRGPQALGHPVVAMAPGPALYTAGAYTPELGLVPRSSPQHGMVSS
PYGGVGPGPTPPAAGLPSAPPPQFSGPELAVGIRPATTTVDSVQAPISSHTAPRPNPAPA
PPRPRFPGPPPQPLPVPYTYPMGAKPPLAAPPAQHHFSPGMPTGFSAPRTGPQPHPTRAV
FGPQPPQQPLPLQHPHLFPPQPSGLVPPQTPYPFAPQPGVLGQPPPTLHTQLYPGPSQDP
LPPHSGVLPFPSPGPPQPPHPTLAYGPAPSPRPLGPQAPALSIRGPPPASQPAPTPHLVP
SPAPSPGPGPVPPRPPAAEPAVCLRRGAASADLLSSSPESQHGGAQPPGGGQPLLQPTKV
DAAEGRRPQALRLIEQDPYEHPERLQQLQQELEAFRGQLGDAGALDAIWRELQDAQEHDA
RGRSIAIARCYSLKNRHQDVMPYDSNRVVLRSGKDDYINASRVEGLSPYCPPLVATQAPL
PGTAADFWLMVHEQKVSVIVMLVSEAEMEKQKVARYFPTERGQPMVHGALSLALSSVRTT
ETHVERVLSLQFRDQSLKRSLVHLHFPTWPELGLPDSPSNLLHFIQEVHAHYLHQRPLHT
PVVVHCSSGVGRTGAFALLYAAVQEVEAGSGIPELPQLVRRMRQQRKHMLQEKLHLRFCH
EAVVKHVEQVLQRHGMPLPCKPSAGTSVTQKNHLPQDSQDLVLGGDVPISSIQATIAKLS
IRPSGGLDFPAAGLPGPVEPPGLPPPSLPESTQLPSSSPPPLSSPLPEAPPPEEEQPVPE
VPSLGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKQNFLQAHNGQGLRAARPTDDPLSL
LDPLWTLNKT
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgccccgcatgcctatgatttggctggacctgaaagaggccggtgacttc
cactttcagccggccgtgaagaagtttgtccagaagaattatggagagaatccagaagcc
tacaatgaggaactgaagaagctggagttgctcagacagaatgctgttcgtgttccacgg
gactttgagggctgcagtgtcctccgcaagtacctgggccagctccactacctgcagagt
cgggtccccatgggctcaggccaggaggctgctgtttctgtcacctggactgagatcttc
tcaggcaagtctgtggcccatgaagacatcaagtatgagcaggcctgcattctctacaac
cttggggcgctgcactccatgctgggggccatggacaagcgcatgtctgaggagggcatg
aaggtctcctgcactcacttccagtgcgcagcaggtgcctttgcctacctgcgtgagcac
ttccctcatgcctacagcgttgacatgagccggcagatcctcactctcaatgtcaacctc
atgctgggccaggctcaggagtgccttctggagaagtccatgttggacaacaggaagagc
tttctggtggctcgcatcagtgcacaggtggtggattactacaaggaggcgtgccgggcc
ttggagaaccccgataccgcctcactgctgggccggatccagaaggactggaagaagctg
gtacagatgaagatctactactttgcggctgtggctcatttgcacatggggaagcaggct
gaggagcagcagaagttcggagagcgggttgcgtacttccagagtgccctggacaagctc
aatgaagccatcaagctggccaagggccagcctgacactgtgcaagatgcacttcgcttc
actatggacgtcattgggggaaaatacaattctgccaagaaggacaatgatttcatctac
cacgaggctgtcccagcactggacacccttcagcctgtaaaaggtgcccccttggtgaag
cccttaccagtgaaccccacagacccagctgttacgggccctgacatcttcaccaaactg
gtacccatggctgcccatgaagcctcgtcgctgtacagtgaggagaaggccaagttgctt
cgggagatgatggccaagattgaggacaagaatgaggtcctggaccagttcatggattca
atgcagctggatcctgagacagtggacaaccttgatgcctacagccacatcccaccccag
ctcatggagaagtgtgcggctctcagcgtccggcccgacactgtcaggaacctcgtccag
tccatgcaagtgctgtcaggtgtgttcacggatgtggaggcctccctgaaggacatcagg
gacctgctggaggaggatgagctgctagagcagaagatgcaggaggcagtgagtcaggca
ggggccagcacggctgtctccaaggccgagctggcagaggtgaggcgagaatgggccaag
tacatggaggtccatgagaaggcctccttcaccaacagcgagctgcaccgtgccatgaat
ctgcatgttggcaacctgcgcctgctcagtgggcctctggaccaggtccgggctgccctg
cccacgccagccctcaccccagaggacaaggcagtgctgcagaacctgaagcgcatcctg
gccaaggtgcaggagatgcgggaccagcgtgtgtccctggagcagcagctgcgtgagctt
atccagaaggatgacatcacagcgtcactggttaccacagaccactcagagataaagaag
ctgtttgaggagcagctgaagaagtatgatcagctgagggtgtacctggagcagaacctg
gccgcccaggacaacattctccgggcactgacagaggccaacgtgcagtacgcatctgtg
cggcgggtgctcagtgaactggaccaaaagtggaactccacgctgcagaccctggtggcc
tcctatgaagcctatgaggacctgatgaagaagtcccaggagggcaaggacttctatgca
gacctggagagcaaggtggctgctctcctcgaacgggcacagtccacctgccaggcccgc
gaggcagcccggcagcagctcctggacagggagctgaagaagaagccgccaccacggccc
acggccccaaagccgctgctgccccgcagggaggagggcgagccagtggaggccggggac
ctgcctgaggagctgcgcagcctgccccccgacaccttcctgggggctgctgtcccactc
cacttcccgcccggccccttccccagctctgcaggcccaggaccccactatctctcaggc
gccttaccgccgggtacctactcgggccccgcccagatgttgcagcccaggggcccccag
gccctagggcaccctgtggtggccatggcacctggacctgctctctacacagccggggcc
tacacaccagagctgggcctcgtgccgcgatcctcgccacagcatggcatggtgagcagt
ccctatggtggggtggggcccgggcccaccccaccagctgcaggcctgccctcagcccca
cctccccagttctcgggccctgagttggccgtggggattcggccagccaccaccacagta
gatagcgtccaggcccccatctccagccacacggcaccacggccaaaccctgcccctgct
cctccccggccccgctttccggggccgcccccccagccactgcccgtgccctacacctac
ccgatgggggccaagccacccctcgcagctcccccagcccagcaccacttttctcctggg
atgcccacaggtttttcagccccgaggactgggccccagcctcatcccacacgagcagtg
tttgggccccagcctccccagcagccccttccactccagcatccgcacctcttcccaccc
cagccttcaggactggtacccccacagaccccctatccctttgctcctcagcctggtgtc
ctggggcagccaccgcccaccctgcatacccagctctacccaggcccctctcaggaccct
ctgcccccccactcaggggtgctgcctttccccagccctgggccccctcagcctccccat
cccaccctggcatatggtcctgccccttcccccagacccctgggcccccaggcccccgca
ctctccattcgaggccctccgcctgccagccagcccgcccccactccccacctggtgcct
tcgcctgccccatcaccggggcccggccccgtccctcctcggccccctgcagcagagcca
gccgtgtgtctgcgccgaggcgctgcgagtgcagatctgctctcctccagccctgagagt
cagcatggaggcgctcagcctcctgggggtgggcagcccctgctgcagcctactaaggtg
gatgcggctgagggccggcggccacaggccctgcggctgatcgagcaggacccctatgag
cacccggagaggctgcagcagttgcagcaggagctggaggcctttcggggccagctgggc
gatgcaggggctctggacgctatctggcgggagctacaagacgcacaggagcacgatgcc
cgtggccgttccatcgccatcgcccgctgctactcactgaagaaccggcaccaggatgtc
atgccctacgacagcaaccgtgtggtgctgcgctcaggcaaggacgactacatcaacgcc
agccgcgtggaggggctctcaccgtactgcccacctttggtggccacccaggcccccctg
cctggcacagctgccgacttctggctcatggtgcatgagcagaaagtgtcagtcattgtc
atgctcgtgtctgaggccgagatggaaaagcaaaaggtggctcgctacttccctaccgag
aggggccagcccatggtgcacggtgccctgagcttggccctgagcagtgttcgcaccacc
gagacccatgtggagcgggtgctgagcctgcagttccgggaccagagcctcaagcgctcg
ctcgtgcacctccacttccccacatggccagagttaggcctgccggacagccccagcaat
ctgctgcacttcatccaggaggtacacgctcattacctgcatcagcgccccctgcacacg
cctgttgtcgtccactgcagctccggggtgggccgcacaggagccttcgcgctgctctac
gcggctgtgcaggaggtggaggctggaagtgggatccctgagctgcctcagctggtgcgg
cgcatgcggcagcagaggaaacacatgctgcaggagaagctgcatctcaggttctgccat
gaggcggtggtgaaacacgtggagcaggtcctgcagcgccacggcatgccccttccgtgc
aagccctctgctggcaccagtgtcacacagaagaatcaccttcctcaggactcccaggac
ctggttctcggtggggatgtgcccatcagctccatccaggccactatcgccaagctcagc
atccggccttccgggggcttggatttcccggctgccggcctgccaggccctgtagagccc
ccaggcctgccgccacccagcctcccagagtccacccagctcccatcctcctccccaccc
cctctctcttcacccctgcctgaggcccctccgcctgaggaggagcagccggtacctgag
gtccccagcctggggcccccctcctcctccctggagctgctggcctccctaactcctgag
gccttctctctggacagctccttgaggggaaagcagcggatgagcaagcagaactttctg
caggcccataacgggcagggtctgcgggctgcccggcccactgatgaccccctcagcctt
ctggatccactctggacactcaacaagacctga
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integrated database retrieval system
