Globicephala melas (long-finned pilot whale): 115846779
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Entry
115846779 CDS
T11080
Symbol
STAG3
Name
(RefSeq) cohesin subunit SA-3
KO
K13055
cohesin complex subunit SA-3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115846779 (STAG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115846779 (STAG3)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
115846779 (STAG3)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
PDS5
Motif
Other DBs
NCBI-GeneID:
115846779
NCBI-ProteinID:
XP_030701762
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Position
15:6649034..6674372
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AA seq
1239 aa
AA seq
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MATLRSSSSQSHSSSSPSSGSSPLRRAVGTGPRSMSASSSSSVAVPCDDRDSDQTSEGDS
ESLSAGEGSDFEDNLRRNVKKRAAKRPLKTTPVAKRPKKGSQMVRAHGQKESEPPASDLF
EAVKAAKSDMQSLVDEWLDSYKQDQDAGFLELINFFIRSCGCKGTVTPEMFKKMSNSEII
QQLTEQFNEDSGDYPLIAPGPSWKKFQGSFCEFVRTLVYRCQYSLLYDGFPMDNLISLLT
GLSDSQVRAFRHTSTLAAMKLMTSLVRVAFQLSLHKDNNQRQYETERNKGPGQRAPERLE
SLLEKRKELREHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIGSWIQSYSTSFLT
DSYLKYIGWTLHDKHREVRLKCLKALKGLYGNRDWTARLELFTSRFKDRLVSMVMDREYD
VAVEAVRLLTLILKNMEGMLTEADCESIYPVVYASNRALASAVGEFLYWKLFCPECETRT
VGERERRRSPRSQRTFFHLLLSFFVESELHYHAAYLVDSLWDCAGPQLKDWESLTSLLLE
KDQNLGDVQESTLTEILVSSVRQASEGHPPVGRVTGRKGLTPKERKIQADDKVKLTEHLI
PLLPQLLAKFSADAEKVAPLLQLLNYFDLNIYCTRRLEKHLELLLQQLQEVVVKHAEPAV
LEAGAHALYLLCNPEFTFFSRVDFARSQLVDLLTDRFQQELEELLQCSFLDEDEVYSLAA
TLKRLSAFYNAHDLTRWELYEPCYRLLRKAVDTGEVPHQVILPALTLVYFSILWTLTHVS
GSDASQKQLLNLKGRMVAFCELCQNCLSDVDPEIQEQAFVLLSDLLLIFGPQMIVGGREF
LRPLVFIPEATLQSELASFLMDHVFIQPGGLGSGHSQEDHLQIEQLHQRRRLLAGFCKLL
LYGVLEMDAASDVFKHYNKFYNDYGDIIKETLTRARQIDRSHCSRILLLSLKQLYTELLQ
EQGPQGLNELPAFIEMRDLARRFALSFGPQQLQNRDLVVMLHKEGIRFSLSELPPAGSSS
QPPNLAFLELLSEFSPRLFHQDKQLLLSYLEKCLQRVCQAPGHPWGPVTTYCQSLSPVES
TAEANPQGYPRSKKRRIEGPSRRHREDISASQEESLQLNSIPPTPTLTSTAVKSRQPLGG
LEEMEEGGGSELAFTQGQPLLGAQRLRSSSPQHFQTPLNSLGPGLGSRLTRLSLMEEDEE
EVEIQNDSSEEWQGTGKQSSPSEHGLDLLDFTELNTEDF
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctgcggtcgtcgtcctcccagtcccatagctcctcctccccgagcagtggg
tcctccccgctgcgcagagctgtggggactgggccgaggagcatgtctgcgtcttctagt
tcgtctgtcgctgtgccctgcgatgacagggactcggaccagacatcggagggggatagt
gaatctttgtcagctggtgaaggcagtgacttcgaagacaacttgagacgaaatgtaaag
aagagagcagcaaaacgaccactcaaaacaaccccagtggcaaaacgtccaaagaagggg
tcccaaatggtacgtgctcatggtcagaaagagtcagagccaccagccagtgatctcttt
gaggctgtgaaagctgccaaaagtgacatgcagtctttggtagatgagtggctggatagc
tacaagcaagaccaggatgcaggattcctggagctcattaactttttcatccgatcatgt
ggatgtaaaggcactgtgacccctgagatgttcaagaagatgtccaactcggagatcatc
cagcagctaacagaacagtttaatgaggactcaggagactatcctctgatagctccaggc
ccatcctggaagaagttccagggcagcttctgtgaatttgtgaggacgttggtctatcgg
tgccagtatagcctcctctatgatggcttccctatggacaacctcatctctctgctcact
ggcctctcagactcccaagtccgtgccttccgtcacactagcaccctggctgccatgaag
ctgatgacctccttggtaagagttgccttccaactgagtctgcacaaggacaacaatcaa
cgtcagtacgagactgaacgaaacaaggggccaggacagagagcacctgagcgactggag
agcctgttggagaaacgcaaagagctcagagagcatcaagaggagattgagggaatgatg
aatgccctcttcaggggtgtctttgtacatcggtacagggatgtccttcctgagatccgt
gctatctgcattgaggagattgggtcttggatacaaagctacagtacctctttcctcact
gacagctatttaaaatatattggctggaccctgcatgataagcatcgagaagtccgtctg
aagtgcttgaaggctctaaaagggctgtatggcaaccgagactggactgcacgcctggag
ctctttaccagccgctttaaggaccggttggtttccatggtcatggaccgagagtatgac
gtggcagtggaggccgtcaggttactaacacttattcttaagaacatggaagggatgctg
acagaggcagactgtgagagcatctaccctgttgtgtatgcctctaacagagccctggcc
tctgctgtgggggagtttctgtactggaagcttttctgccctgagtgtgagacaagaacg
gtgggtgagagagagcgacgccgaagtccacgctcccagaggactttcttccaccttctg
ctgtccttttttgtggagagtgagctccattaccacgctgcatacttagtagacagcctg
tgggactgtgcggggcctcagctgaaggactgggagagtctgacaagcctgctgctggag
aaggaccagaacctgggcgacgtacaggagagcacactgacagaaatccttgtgtccagt
gtccggcaagcttccgagggtcacccgcctgtggggcgggtcacggggaggaagggctta
acacccaaagaacgtaagatccaagccgacgacaaggtgaagctgactgagcacctcatc
cccctgcttccccagctcctggccaagttctcagctgatgcagagaaggttgctcccctg
ctgcagcttctcaactactttgacctcaacatctactgcaccaggcgcttggagaaacac
ctggagctgctcctgcagcagctccaggaggtggtggtgaagcacgcagaaccagcggtg
cttgaggctggtgctcatgccctctatctgctgtgtaatccggagttcacgttcttcagc
cgggtggactttgcccgcagccaacttgtggatctgctgactgaccgcttccagcaggag
cttgaagagctgctgcagtgttccttcctagatgaggatgaggtgtacagtctggcagcc
accctgaagcgcctctctgccttctacaatgcccatgacctaactcgctgggagctctat
gagccctgctaccgactcctccggaaggctgtggacacaggagaggttcctcaccaggtg
atcttaccagccttgactcttgtctatttttccattctctggacactaacccacgtatct
ggatcagatgcttcccagaagcagctgttgaatttgaagggcaggatggtggccttctgt
gaactctgccagaactgcctctcagatgtggatcctgagattcaggagcaggcttttgta
ttgttaagtgatctgctgctcatcttcggccctcagatgattgtcgggggacgagagttc
cttaggccccttgtctttattcctgaagccactctccagtctgagctggccagcttcctc
atggaccacgtcttcatccagcctggaggactgggcagtggtcattcccaggaggatcat
ttacagatagagcagctgcaccagcggcgccgcctcctggctgggttctgcaagctgttg
ctttatggggtgctggagatggacgcagcctcggatgttttcaaacactacaacaagttc
tacaatgactatggtgacattatcaaggaaacgttaactagagcaaggcagattgaccga
agtcactgttcccgaatcctgctgctgagcctcaagcagttatacacagaactgctgcag
gaacaggggccccagggcctgaatgagcttccagccttcatcgagatgagggacctggcc
aggaggtttgccttgagctttggaccccagcagctacagaaccgtgaccttgtggtcatg
ctacacaaggaaggcatcaggttctccttgtctgagcttcctccagctggctcctccagt
cagcccccaaatctggcattcctggagctcctttcagagttctccccccgactcttccat
caggacaagcagctgctactgtcctacctggaaaagtgtctgcaacgtgtctgccaggca
cctggccatccctggggtccagtcaccacctactgccagtccctcagccctgtagagagt
acagcagaggccaatcctcagggctacccccgctccaagaagaggcgcattgaaggcccc
tccaggcggcacagagaggacatctctgcatcacaggaggaaagcctacagctgaacagt
atcccacccacacccaccctcacctcaacggctgtgaaaagtaggcagcccctgggggga
ttggaagagatggaagaaggcggcggctcagaattggcatttacccaaggccagcccctt
ttaggtgcccagaggttaaggtcctcgagtccacagcatttccagactccactcaactct
ttgggtcctggtctgggcagccggctgacccggctcagcctgatggaagaggatgaagaa
gaagtagaaattcagaatgactcaagtgaagagtggcaaggtacaggcaagcagtcttcc
cccagtgagcacgggctggacctcttagattttacagagctgaacactgaggatttctga
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