Globicephala melas (long-finned pilot whale): 115846806
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Entry
115846806 CDS
T11080
Symbol
ARPC1B
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04144
Endocytosis
gmf04517
IgSF CAM signaling
gmf04519
Cadherin signaling
gmf04530
Tight junction
gmf04666
Fc gamma R-mediated phagocytosis
gmf04810
Regulation of actin cytoskeleton
gmf05100
Bacterial invasion of epithelial cells
gmf05132
Salmonella infection
gmf05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115846806 (ARPC1B)
04519 Cadherin signaling
115846806 (ARPC1B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115846806 (ARPC1B)
09144 Cellular community - eukaryotes
04530 Tight junction
115846806 (ARPC1B)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115846806 (ARPC1B)
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
115846806 (ARPC1B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115846806 (ARPC1B)
05135 Yersinia infection
115846806 (ARPC1B)
05100 Bacterial invasion of epithelial cells
115846806 (ARPC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115846806 (ARPC1B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmf04812
]
115846806 (ARPC1B)
Membrane trafficking [BR:
gmf04131
]
Others
Actin-binding proteins
Arp2/3 complex
115846806 (ARPC1B)
Cytoskeleton proteins [BR:
gmf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
115846806 (ARPC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
eIF2A
Beta-prop_TEP1_2nd
PEP5_VPS11_N
EIF3I
RMC1_N
SH3_3
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115846806
NCBI-ProteinID:
XP_030701846
LinkDB
All DBs
Position
15:6031179..6043836
Genome browser
AA seq
372 aa
AA seq
DB search
MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPQENKFAVGSGSRVI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADADKKMAVATL
ASETLPLLALTFITENSLVAAGHDCFPVLFTYDGAAGTLSFGGRLDVPKQSSQRGLTARE
RFQNLDKKASSEGSTAASGGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVK
SLESALKDLKIK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcacagcttcctggtggagcccatcagctgccatgcctggaacaaggaccgc
acccagatcgccatctgccccaacaaccacgaggtgcacatctatgagaagagtgggaac
aagtgggtccaggtgcacgagctcaaggagcacaacgggcaggtgacaggcatcgactgg
gcccccgagagtaaccgcatcgtgacctgcggcacagaccgcaatgcctacgtgtggacg
ctgaaaggccgcacatggaagcccacgctcgtcatcctgcgcatcaaccgcgccgctcgc
tgtgtgcgctgggctccccaggagaacaagtttgctgtgggcagtggctcccgtgtcatc
tccatctgctattttgagcaggaaaacgactggtgggtttgcaagcacatcaagaagccc
attcgctccaccatcctcagcctggactggcatcccaacaacgtgctcctggccgccggc
tcctgtgacttcaagtgccggatcttctcagcctacatcaaggaggtggaggagcggcca
gcacccaccccgtggggctccaagatgcccttcggggagctgatgtttgagtccagcagc
agctgcggctgggtgcacggggtctgcttttccgccagcggcagccgtgtggcctgggtc
agccatgacagcaccgtgtgcctggctgatgccgacaagaagatggccgtcgcgactctg
gcctctgaaacgctgccgttgctggccctgaccttcatcacagaaaacagtctggtggca
gcgggccacgactgcttcccggtgctgttcacttacgacggcgccgcggggacactaagc
ttcggtgggcggctggacgtgcccaagcaaagctcgcagcgcggcttgacggcccgcgag
cgcttccagaacctcgacaagaaggcgagctcggagggcagcacggcagcaagcgggggc
ctggactcactgcacaagaacagtgtcagccagatctcggtgctcagtggggggaaggcc
aagtgctcgcagttctgcactacaggcatggacggcggcatgagcatctgggatgtgaag
agcttggagtcagccttgaaggatctcaagatcaaatga
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