KEGG   Globicephala melas (long-finned pilot whale): 115846894
Entry
115846894         CDS       T11080                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X2
  KO
K15361  WD repeat-containing protein 48
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115846894 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115846894 (WDR48)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     115846894 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IP5PC_F WDR54 Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 115846894
NCBI-ProteinID: XP_030702027
LinkDB
Position
11:42921395..42965082
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDTFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PIDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggcagggcggaggaaagtacaggtttcctatgtt
attcgagatgaagtggagaagtacaaccgaaatggggtcaatgccctgcagctggaccca
gcactaaacagacttttcacggcaggtcgagactccatcataagaatatggagtgtcaat
cagcacaagcaagatccatatatagcatctatggaacaccataccgattgggtaaatgac
attgtactctgttgtaatgggaaaacattaatatctgcttcctctgatacaacagtaaaa
gtatggaatgcacataagggattttgcatgtcaacattaaggactcataaggattatgta
aaagccttagcatatgccaaggataaagaactggtagcatcggctgggttggaccgacaa
atattcctttgggatgtgaatactctaacagcattgactgcctcaaataacactgtaaca
acttcttctttaagtgggaacaaagattccatttatagcctggcaatgaatcaactggga
acaatcattgtatcagggtccactgagaaggttttaagagtatgggatccaagaacatgt
gcaaaactaatgaagcttaaagggcacacggataatgttaaagcattgctgttgaacaga
gatggcacacagtgcctttctggcagttctgatgggacaattcgcctttggtcccttggc
cagcagagatgtatagcaacgtaccgagtgcatgatgaaggtgtttgggctctacaggtc
aatgacaccttcacacatgtgtactctggaggaagggaccggaagatttattgtacagac
ctaagaaaccctgacattcgggtgctaatctgtgaagaaaaagcaccagttctcaagatg
gagcttgacagatcagctgatccccctcctgcaatctgggttgcaacaacgaagtctaca
gtaaataaatggacattgaaaggaattcataattttagagcctctggagattatgacaat
gactgtacaaatcctataacacccctttgtacacaacccgaccaggttattaaagggggt
gctagtattattcagtgtcacattcttaatgataagagacatatattaaccaaagatacc
aataataatgtggcatattgggatgtattaaaggcatgtaaagttgaagatctgggcaaa
gtggattttgaagatgaaattaagaaaagatttaagatggtgtatgtaccaaattggttc
tcagtagacttaaaaacagggatgttgacaattactttggatgagagtgactgttttgct
gcttgggtttctgcaaaagatgctggctttagcagccccgacgggtcagatccaaaactg
aacttaggaggacttttactccaggccctcctagaatattggcctaggacgcatgtgaat
ccaatagatgaagaagaaaatgaagtaaaccatgtaaatggggagcaggagaaccgagta
cagaagggaaatggctatttccaggtgcccccacacactcctgtgatctttggtgaagct
ggaggtcgcaccttgttcaggctgctctgccgagactctgggggtgagactgagtccatg
cttctgaatgagacagtgccacaatgggtaattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacctta
aaaaaagatagactctctgctagtgacatgcttcaagtccggaaagtaatggaacacgtc
tatgagaaaatcatcaacttggataatgagtctcaaaccactagctcttctaataatgaa
aaaccaggagaacaggaaaaagaagaggatattgctgtgttggcagaggagaaaattgaa
cttttgtgccaggaccaggttttggatccaaatatggaccttcgaacagtgaaacacttc
atatggaagagtggtggtgacctcaccctccattaccgtcagaagtccacgtga

DBGET integrated database retrieval system