Globicephala melas (long-finned pilot whale): 115846981
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Entry
115846981 CDS
T11080
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115846981 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115846981 (VPS45)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115846981 (VPS45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
115846981
NCBI-ProteinID:
XP_030702252
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Position
1:complement(80202376..80269773)
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AA seq
570 aa
AA seq
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MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVDYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPVQLSRATQGLTALLLSLKKCPMIRYQLS
SETAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYR
KLVSTVIEYGGKRIRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFIIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNT
KSFLEEVLASGLHSRSKDSSQVTSRLASRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtttttgctgtgaagcagtacatttccaaaatgatagaggacagcggaccg
ggcatgaaagtacttcttatggataaagagacgacaggcatagtgagtatggtatacaca
caatcggaaattctccagaaggaagtgtacctttttgaacgcattgattctcaaaatcga
gagatcatgaaacacctgaaagcaatttgttttcttcgacctacaaaggagaatgtggat
tatctgattcaggagctccgaagacccaaatacagtatatattttatttatttcagtaat
gtgatcagcaagagtgatgtgaagtcattagctgaagctgatgaacaggaagtggtggct
gaggttcaggaattttatggtgattacattgctgtgaatccacatttgttttccctcaat
attctgggttgctgccagggtcgaaattgggatccagtccaactatccagagcaactcaa
ggactgacagctctccttttatctctgaagaaatgtcccatgattcgttaccagctttca
tcagagacagcaaagagacttgcagaatgtgttaagcaggtgataactaaagaatatgaa
ctgtttgaattccggcggactgaggttcctccattgctacttattttagatcgctgcgat
gatgccatcaccccattgctaaaccagtggacatatcaggccatggtccatgaactactg
ggcataaacaacaatcggattgatctttccagagtgccagggatcagtaaagacttgaga
gaggtggtcctatctgccgaaaatgatgaattctatgctaacaatatgtacctgaacttt
gctgagattggtagcaacataaagaatctcatggaagactttcagaagaagaaaccaaaa
gaacagcaaaaactagaatcaatagcagacatgaaggcctttgttgagaattacccacaa
ttcaagaagatgtctgggactgtatcaaagcacgtgacagtggttggagagctgtctcgg
ttggtcagtgagcggaatctgctggaggtttcggaggttgagcaagaactggcctgtcaa
aatgaccattctagtgctctccagaatgtaaagaggctcctgcagaaccccaaagtgacg
gagtttgatgctgcgcgcctggtgatgctttatgctctacattatgagcgacacagcagc
aatagcctaccaggattaatgatggaccttaggaataaaggtgtttctgagaagtatcgc
aagcttgtgtctacagttattgaatatggtggtaaacggatcagaggaagtgacctcttc
agccccaaagatgctgtggctattaccaaacagttcctcaaaggattgaagggagtagaa
aatgtatatactcagcatcagcctttcttacatgagaccctggaccatctcatcaaagga
aagctcaaggaaaacctgtatccttatctaggccccagcacactcagagacagacctcag
gatatcattgtgtttataattggaggagccacctatgaagaggctctaacagtttataac
ctgaaccgtaccactcctggagtgaggattgtcctggggggaaccactgtgcataacacg
aaaagtttcctagaggaagttctggcttctggactgcacagccgaagcaaggacagctct
caagttacatcaaggttagcaagcagaagatga
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