Globicephala melas (long-finned pilot whale): 115847019
Help
Entry
115847019 CDS
T11080
Symbol
SNX27
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115847019 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115847019 (SNX27)
Membrane trafficking [BR:
gmf04131
]
Protein recycling
Others
Others
115847019 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115847019 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
SNX17-31_F2_FERM
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
115847019
NCBI-ProteinID:
XP_030702343
LinkDB
All DBs
Position
1:complement(78930833..79016342)
Genome browser
AA seq
543 aa
AA seq
DB search
MADEDGEGIHPSAPHRNGGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVR
GQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV
DLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGE
KFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRG
LEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTD
QVYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIR
KWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNML
RTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWD
TDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRD
VAT
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggacggggaagggattcacccctcagcccctcacaggaacggaggtggc
ggcggcggcggcggtggggggtctgggctccactgcgccgggaacggcggcgggggaggc
ggcggcccgcgggttgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtgcgg
ggccaagtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctg
cagcatgtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggg
gaccgcattctggaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtg
gacctgatccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcat
gaggcagataacctagatcccagtgacgactcgttgggacagtcattttatgattacaca
gaaaagcaagcagtgcccatatcggtccccacatacaaacatgtggagcagaatggtgag
aagtttgtggtatacaatgtttacatggcagggaggcagttgtgttctaagcggtaccgg
gagtttgccatcctacaccagaacctgaagagagagtttgccaactttacatttccccga
cttccagggaagtggccattctctttatcagaacagcaattagatgcccgacgtcggggg
ttggaagaatatctagaaaaagtgtgctcaatacgagtcattggtgagagtgacatcatg
caggaattcttatcagaatcagatgagaactacaatggtgtgtctgacgtagagctgaga
gtagcattaccagatggaacaacagttacagtcagggttaaaaagaacagtactacagac
caagtatatcaggctattgcagcaaaggttggcatggacagtacgacagtgaattacttt
gccttatttgaagtgatcaatcattcctttgtacgtaagctggcacctaatgaatttcct
cataaactctacgtccagaattacacatcagctgtgccaggcacctgcctaaccattcga
aagtggctttttacgacagaagaagaaatcctcttaaatgacaatgaccttgctgttacc
tacttctttcatcaggctgttgatgatgtgaaaaaaggttacatcaaagcagaggaaaaa
tcctaccaattacagaagctgtatgaacaaaggaaaatggtcatgtacctcaacatgcta
aggacttgtgagggctacaatgaaatcatcttcccccactgtgcctgcgactccaggaga
aaggggcatgttatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaa
gaaggacagctggagaaccaggtaatagcatttgaatgggatgagatgcaacgatgggat
acagatgaagaaggaatggccttctgttttgaatatgctcgaggagagaagaagcctcga
tgggttaaaatcttcacaccatatttcaattacatgcatgaatgcttcgagagggtgttc
tgcgagctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagggat
gtggccacctag
DBGET
integrated database retrieval system
