Globicephala melas (long-finned pilot whale): 115847022
Help
Entry
115847022 CDS
T11080
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04659
Th17 cell differentiation
gmf04710
Circadian rhythm
gmf05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
115847022 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
115847022 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
115847022 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115847022 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmf03310
]
115847022 (RORC)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115847022 (RORC)
Nuclear receptors [BR:
gmf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115847022 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115847022
NCBI-ProteinID:
XP_030702348
LinkDB
All DBs
Position
1:78790691..78815028
Genome browser
AA seq
518 aa
AA seq
DB search
MDRAPQRHHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQREQAAKTPPAGAQGADPLACTLGLPGGQLPLGSSPDLPEASACPPSLLRAP
GCGPSYSNSLAKAGLNGASYHLEYSPERGKTDGRENCYGSGSQPTPDRCGLHFEDPRHPG
LGEPGRGPDSYFSPSFRSTPEAPYASLTEIEHLVQNVCKSYRETCQLRLEDLLGQRSTVF
SREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALY
TALVLINANRPGLQEKRKVEQLQYSLELAFHHHLCKTHRHGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgagcctcgcaggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaaatcatctggg
atccattacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgtaacgtggcttactcctgcacccgtcagcagaactgccccattgaccgcactagccga
aaccgatgccagcactgccgcctgcagaaatgcctggccctgggcatgtcccgagacgct
gtcaagtttggccgcatgtccaagaagcaaagggacagcctgcatgctgaggtgcagaaa
caactgcaacagcggcaacagcagcaaagggaacaagcggccaagacccctcctgcagga
gcccaaggagcagaccccctcgcctgcaccttggggctcccaggtgggcagctgcccctg
ggctcctcgcctgacctgccggaggcctcagcctgtccccccagtctcctgagagcccca
ggctgcgggccctcctactccaacagcttggccaaggccgggctcaacggggcctcgtac
cacctggaatacagccctgagcggggcaagaccgacggcagagagaactgctatggctca
ggcagccagccgacccctgacaggtgtggactccacttcgaggaccccaggcaccctggg
cttggggaaccaggacggggcccggacagctacttcagccccagtttccgcagcacccca
gaggcgccttatgcctccctgacagagattgagcatctggtgcagaacgtttgtaagtcc
taccgagagacgtgtcagctgcggctggaggacctgctcggacagcgctccaccgtcttc
tcccgagaggaggtggccggctaccagaggaagtcaatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgctaagaggctctcgggc
tttatggagctctgccagaatgaccagatcgtgctactcaaagcaggagccatggaagta
gtgctggtcaggatgtgccgggcctacaatgctgacaaccatacagtcttttttgaaggc
aaatacggtggcatggagctcttccgagccttgggctgcagcgagctcatcagctccatc
tttgacttctcccactccctgagtgccttgcatttttccgaggacgagattgccctctac
acggccctcgtcctcatcaacgccaaccggccagggctccaagagaaaaggaaagtagaa
cagctgcagtacagtctggagctggcctttcatcatcatctctgcaagactcatcgccac
ggcatcctggcaaagctgccacccaaggggaagcttcggagcctgtgtagccagcatgtg
gaaaagctgcaaaccttccagcatctccaccccatcgtggtccaagctgctttccctcca
ctctacaaggaactcttcagcactgaaatcgagtcacctgaggggctgtccaagtga
DBGET
integrated database retrieval system
