Globicephala melas (long-finned pilot whale): 115847774
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Entry
115847774 CDS
T11080
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115847774 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115847774 (CNOT3)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115847774 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115847774 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
115847774
NCBI-ProteinID:
XP_030703761
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Position
19:complement(3963168..3980126)
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AA seq
735 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQS
PAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTAPGNNGAPAPAAPPSALGAKASP
APSHSSGTPAPYAQAVAPPASSGPSPAQPRPPSVQPGGGGGGGKQNGATSYSSVVADSPA
EVALSSGGGSSANSQALGPPSGPHNPPPSTSKEPNATAPTGAGGVAPGSGNNSGGPSLLV
PLPVNPPSSPTPSFSEAKAAGALLNGPPQFSAAPEIKAPEPLSSLKSMAERAAISSGIED
PVPTLHLTERDIILSSTSAPPASAQPALQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAME
EAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYL
EGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKE
GFTFEYRYLEDRDLQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacttgggtagcatccaatgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagacc
aaagcctatagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggaa
aaggaggaggtcggccagtggctcacgaataccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcggtgcaaacacgcaagaagaagggcgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcatatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaatgactccatcctcgtggacgcc
atccgcaagatcaaggacgacgtcgagtactacgtggactcgtcccaggaccccgacttt
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccgcccagccacagtcacatggaggatgagatcttcaaccagtcaagcagc
acacccacttcgaccacctccagctcgcccatcccgcccagcccggccaactgcaccacg
gaaaactctgaagatgacaagaagaggggacgctcgacggatagtgaaatcagccagtct
ccagccaaaaacggctccaagcctgtccacagcagccagcaccctcagtccccagctgtg
ccgccaagctacccctccggccccccgcccgccgcctctgccctgagcaccgcccctggc
aacaacggggcccctgccccggcagcacccccaagcgccctgggcgccaaggccagccca
gctcccagccacagctcgggcacgcccgccccctacgcccaggctgtggccccgccagct
tccagtgggcccagccccgcgcagccccggccccccagcgtgcagcccggcggaggcgga
ggtggaggcaagcagaacggcgccaccagttacagctcagtagtggcagacagcccggca
gaggtggctctcagcagcggcgggggcagcagtgccaacagccaggccctgggccccccg
tctggcccccacaacccacctcccagcacctcgaaggaacccaatgcgacagccccaacg
ggggctgggggcgtggccccaggctcagggaacaactcggggggacccagtctcctggtg
ccactacctgtgaaccctcccagctccccgacacccagcttcagcgaggccaaggcagcc
ggcgccctgctcaatggacctccacagttcagcgctgccccggagatcaaggcccctgag
cctctgagctctttgaagtccatggcggagcgggcagccatcagctccggcatcgaggac
cccgtccccacgctgcacctgactgagcgagacatcatcctgagcagcacgtcagctccc
ccagcctcggcccagccggccctgcagctgtcggaggtgaacataccgctgtcactgggt
gtgtgtcccctggggcctgtgcccctcaccaaggagcagctctaccagcaggccatggaa
gaggccgcctggcatcacatgccccacccctcagactctgagcgcatccggcagtacctc
ccccggaacccctgcccgacgcccccctaccaccaccagatgccgcccccgcactcggac
actgtggagttctaccagcggctgtcaaccgagacgctcttcttcatcttctactatctg
gagggcactaaggcacagtacttggcagccaaggccctaaagaagcagtcatggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgacgag
tttgagcagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaa
ggcttcacctttgagtaccgctacctggaggaccgggacctccagtga
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