KEGG   Globicephala melas (long-finned pilot whale): 115847967
Entry
115847967         CDS       T11080                                 
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03320  PPAR signaling pathway
gmf04659  Th17 cell differentiation
gmf04919  Thyroid hormone signaling pathway
gmf04920  Adipocytokine signaling pathway
gmf04928  Parathyroid hormone synthesis, secretion and action
gmf05200  Pathways in cancer
gmf05202  Transcriptional misregulation in cancer
gmf05207  Chemical carcinogenesis - receptor activation
gmf05216  Thyroid cancer
gmf05222  Small cell lung cancer
gmf05223  Non-small cell lung cancer
gmf05226  Gastric cancer
gmf05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    115847967 (RXRG)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    115847967 (RXRG)
   03320 PPAR signaling pathway
    115847967 (RXRG)
   04919 Thyroid hormone signaling pathway
    115847967 (RXRG)
   04928 Parathyroid hormone synthesis, secretion and action
    115847967 (RXRG)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    115847967 (RXRG)
   05202 Transcriptional misregulation in cancer
    115847967 (RXRG)
   05207 Chemical carcinogenesis - receptor activation
    115847967 (RXRG)
  09162 Cancer: specific types
   05226 Gastric cancer
    115847967 (RXRG)
   05216 Thyroid cancer
    115847967 (RXRG)
   05222 Small cell lung cancer
    115847967 (RXRG)
   05223 Non-small cell lung cancer
    115847967 (RXRG)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    115847967 (RXRG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmf03000]
    115847967 (RXRG)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:gmf03310]
    115847967 (RXRG)
Transcription factors [BR:gmf03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    115847967 (RXRG)
Nuclear receptors [BR:gmf03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   115847967 (RXRG)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 115847967
NCBI-ProteinID: XP_030704103
LinkDB
Position
1:67371994..67475050
AA seq 463 aa
MYGNYSHFMKFPTGFGGSPGHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtacggaaattattctcacttcatgaagtttcccacaggcttcggaggctcccccggc
cactctggctccacgtccatgagcccgtcggcagccttgtccacagggaagcccatggac
agccaccccagctacactgacaccccagtgagtgccccacggactctgagtgcagtgggg
acccccctcaatgccctgggctctccatatcgagtcatcacttctgccatgggcccaccc
tcaggagctcttgcagcccctccaggaatcaatttggttgccccgcccagctctcagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaaacccttaccagggcttcctggc
attggaaacatgaactacccatccactagccctggatctctggttaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtgtacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatctacacgtgtcgggataataaagac
tgcctcattgacaagcgtcagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagaaaggcagagaagccgggagcgggct
gagagtgaggcagaatgtgccagtagcggccatgaagatatgcccgtggagaggattctg
gaggctgaacttgctgttgaaccaaagacagaatcctacggtgacatgaacatggagaat
tcgacaaatgaccctgtcaccaacatatgccatgctgctgacaagcagctctttactctc
gttgaatgggccaagcgtattccccacttctctgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgaattgctgatcgcctccttttcccaccgctccgtttct
gtgcaggatggcatccttctggccacgggtttacacgtccaccggagcagtgcccacagt
gctggggttggctccatctttgacagagttctgactgagctggtctccaaaatgaaagac
atgcagatggataagtcggagctggggtgcctacgagccatcgtgctctttaacccagat
gccaagggtctgtccaacccctctgaggtggagactctgcgagagaaggtttatgccacc
ctcgaggcctacaccaagcagaagtacccggaacaaccaggcaggtttgccaagctcttg
ctgcgcctcccagccttgcgctccatcggcttgaagtgcctggagcacctcttcttcttc
aagctcatcggggacacacccattgacaccttcctaatggagatgctggagaccccactg
cagatcacctga

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