Globicephala melas (long-finned pilot whale): 115848091
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Entry
115848091 CDS
T11080
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115848091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115848091
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115848091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
115848091
NCBI-ProteinID:
XP_030704318
LinkDB
All DBs
Position
15:36146826..36192630
Genome browser
AA seq
1703 aa
AA seq
DB search
MAVLRQLALLLWKNYTLQKRKVLVTILELFLPLLFSGILIWLRLKIQSENVPNATLYPGQ
SIRELPLFFSFPPPGAAWELAYIPSQSDAVRTVVETVRRMLVINMRARGFPSEKDFEDYV
RYDNRSANVLAAVVFEHAFNHSRDPLPLAVKYHLRFSYTRRNYMWTQTGSFFLRETEGWH
TTSLFPLFPSPGPREPTSPDGGEPGYIREGFLAVQHAVDRAVMQYHANASTHQLFEKLTV
IAKRFPYPPFISDPFLVAIQYQLPLLLMLSFTYTSLSIIRAVVQEKERKLKEYMRMMGLS
SWLHWTAWFLLFFLFLLITVSFMTLLFCIKVKKNVAVLAHSDPSLVLVFLACFAISSISF
SFMVSTFFSKANVAAAIGGFLYFFTYIPYFFVAPRYNWMTLSQKLFSCLLSNVAMAMGAQ
LIGKFEAKGTGVQWRDLLSPVNVDDDFSFGQVLGMLLLDSVLYSLVTWYVEAIFPGQFGV
PQPWYFFILPSYWCGHPRTVLGKEEEDDDPEKVLRTEYFEAEPEDLVAGIKIKHVSKVFR
VGNKGKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQD
MAQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSRQKCPEEVKRMLHILSLEDKGDS
RSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGMDAISRRAIWDLLQQHKSDHTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISRLVHHH
VPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDSHLCGMMDPTDGVGTLIEENTAVRLNTGL
ALHCQQFWAMFLKKAAYSWREWKMVTAQVLVPLTCITLALLAINYSSEIFDDPLLKLTLA
EYGRTIVPFSVPGTSRLDQQLSEHLKDMLQAEDQEPREVLGDLEEFLIFRASVEGGGFNE
RCLVAASFRDVGERTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPQASIMVSNYPQPR
SALQAAKDQFNEGRKGFDIALNLLFAMAFLSSTFSILAVSERAVQAKHMQFVSGVHVATF
WLSALLWDLMSFLIPSLLLLVVFKAFDVHAFTQDGHVADALLLLMLYGWAIIPLMYLMSF
FFSGAATAYTRLTIFNILSGIATFLVVTIMRIPAVKLEELSRTLDRVFLVLPNHCLGMAV
SSFYENYETRRYCTSSEVAAHYCRKHNIQYQENFYAWSTPGVGRFVTSMATSGFAYLTLL
FLIETDLLWRLKACLCAFQRRRALTEVYTRTSALPEDQDVVDERNRILAPSLDSLLDTPL
IIKELSKVYEQRAPLLAVDKVSLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAF
VGGYSISSDIGKMRQRIGYCPQFDALLDHMTGRETLVMYARLRGVPECYIGACVENTLRG
LLLEPHANKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARAR
ESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDRQQ
EALEEFKAFVDLTFPGSVLEDEHQGMVHYHLPGNDLSWAKVFGVLEKAKEKYGMDDYSVS
QISLEQVFLSFAHLQPPVEDEGP
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctcaggcagctggcgctcctgctctggaagaactacactttgcagaagcgg
aaggtcctggtgaccatcttggagctcttcctgcccttgctgttttctgggatcctgatt
tggcttcgcctgaagatccagtcagagaacgtgcccaatgccaccctctaccccggccag
tccatccgagagctgccactgttcttcagcttcccgccaccgggagccgcctgggagctc
gcctacatcccatcccagagtgacgccgtgaggaccgttgtggagacagtgaggaggatg
ctggtgatcaacatgagagctcgcggcttcccctccgaaaaggactttgaggactacgtc
aggtacgacaaccgctctgccaacgtgctggccgccgtggtgttcgagcatgccttcaac
cacagcagggatcccctgccgctggcggtgaaatatcacttacggttcagttacacgcga
agaaattacatgtggacccagacaggctcctttttcctgagagagacagaaggctggcac
accacttccctttttccactcttccccagcccaggaccaagggaacccacatcccctgat
ggcggagaacctgggtatatccgtgagggcttcctggccgtgcagcatgccgtggacagg
gctgtcatgcagtaccacgccaacgcctccacgcaccagctgtttgagaagctcaccgtg
atcgccaagaggttcccttacccgccttttatctcggaccccttcctcgtcgccatccag
taccagcttcccctgctgctcatgctgagcttcacttacacctcactcagcatcatccgg
gctgtcgtgcaagagaaagagaggaaactgaaggaatacatgcgcatgatggggctcagc
agctggctgcactggaccgcatggttcctcctgttcttcctcttcctcctcatcaccgtc
tccttcatgaccctgctcttctgcatcaaggtgaagaagaatgtggcagtgctcgcgcac
agtgacccctcgctggtgctagtctttctggcctgctttgctatctcctccatctccttc
agcttcatggtcagcactttcttcagcaaagccaatgtggcagcagccatcgggggcttc
ctctacttcttcacgtacatcccttacttcttcgttgcccctcgatacaactggatgacg
cttagccagaagctgttctcctgcctcctgtccaatgttgccatggcaatgggagcccag
ctcataggaaaatttgaagcaaaaggcacaggtgtccagtggcgagacctcctgagtcct
gtcaacgtggacgacgacttctcctttgggcaagtgctcggcatgctattgctggactcc
gtcctctacagcctggtgacctggtatgtggaggccatcttcccaggccagttcggtgtg
ccccagccctggtatttcttcatcctgccctcatattggtgcggacacccgaggacagtt
ctagggaaagaggaggaagacgatgatcctgagaaagtgcttaggaccgagtactttgaa
gctgagccagaggacctggtagccgggatcaagatcaagcatgtgtccaaggtgttcaga
gtggggaacaagggcaaggcagctgtcagagacctgaacctgaacctgtatgaaggccag
atcactgttctgctgggccacaacggcgcggggaagactaccaccctctccatgctcact
ggtctctttcccccgaccagtggacgggcatatatcagtgggtatgaaatctcccaagat
atggctcagatccggaagagcttgggcctgtgcccgcagcatgacgtcttgtttgacaac
ctgactgtcgcagaacacctgtatttctatgctcagctgaaaggcttgtcgcgccagaag
tgccctgaagaagtcaaacgcatgctgcacatcctcagtctggaggacaagggggactcc
cggagcaggttcctgagcggggggatgaggcgcaagctctccatcggcattgccctcatc
gcaggctccaaggtgctgatgctggacgagcccacctcaggcatggacgccatctccagg
agggccatctgggaccttcttcagcagcacaaaagtgaccacaccatcctgctgaccacc
cacttcatggatgaggccgacctgctgggggaccgcatcgccatcatggccaagggggag
ctgcagtgctgcgggtcatctctgttcctgaagcagaaatatggcgcaggctaccacatg
acgctggtgaaggagcctcactgcaaccccgagggcatctcccggctggtccaccaccat
gtccccaacgccaccctggagagcagtgccggagcagagctgtcgttcattcttcccaag
gagagcacacacaggtttgaaagtctttttgctaaactggagaagaagcagaaggagctg
ggcatcgccagcttcggggcctctgtcaccaccatggaggaagtcttcctgcgggtcggt
aagctggtggacaccagcatggacatccaagccatccagctccctgccctgcagtaccag
cacgagaggcgggcgagtgactgggctgtggacagccacctgtgcgggatgatggacccg
actgacggcgtcggcaccctgattgaggagaacactgccgtcaggctcaacaccgggttg
gccctccactgccagcagttctgggccatgttcctgaagaaggccgcatacagctggcgg
gagtggaagatggtaacggcccaggtcctggtccctctgacatgcatcaccctggccctc
ctggccatcaactactcctccgagatcttcgatgaccccctcctgaagctgaccttggcc
gagtatggcagaaccatcgtgcccttctcggttcccgggacctctcggctggatcagcag
ctgtcagagcatttgaaagacatgctgcaggctgaggaccaggaacctcgagaggtgctg
ggtgacctggaggagttcctgattttcagggcctcggtggaggggggcggctttaacgag
cggtgcctggtggcggcatccttcagagacgtgggcgagcgcacagtggtcactgccctg
ttcaacaaccaggcgtaccactcaccggccaccgcactggccatcgtggacaaccttctg
ttcaagctgctgtgcggccctcaggcctccatcatggtctccaactaccctcagccccgg
agtgccctgcaggccgccaaggatcagttcaacgagggccggaagggattcgacatcgcc
ctcaacttgctcttcgccatggcgttcttgtccagcacgttctccatcctggcggtcagc
gagagggccgtccaggccaagcacatgcagtttgtgagcggagtccacgtggctactttc
tggctctcggctctgctgtgggacctcatgtccttcctcatccccagtctgctgctgctg
gtggtgttcaaagccttcgacgtgcacgccttcacgcaggacggccacgtggccgacgcc
ctgctgctgctcatgctctatggctgggccatcatccccctcatgtacctgatgagcttc
tttttctcgggggcggccactgcctacacgaggctgaccatattcaacatcttgtcgggc
atcgccactttcctcgtggtcaccatcatgcgcatcccagcggtcaagttagaagaactt
tccagaaccctggaccgcgtgttcctggtgctgcccaaccactgtttggggatggcggtc
agcagcttctacgagaactacgagacaaggaggtactgcacctcctccgaagtggcagcc
cactactgccggaaacacaacatccagtaccaggagaacttctatgcatggagcactccg
ggggttggcaggttcgtgacctccatggctacctcagggtttgcctacctcaccctgctc
ttcctcattgagaccgatctgctgtggaggctgaaggcctgcctgtgtgccttccagagg
aggcgggcgctgacagaagtgtacacccggacgtcggcgcttcctgaagaccaggatgtg
gtggatgagaggaaccgcatcctggcccccagcctggactccctgctggacacgcctctg
attatcaaggagctctccaaggtgtatgagcagcgagcacccctcctcgccgtggacaag
gtctccctcgcagtccagaaaggggagtgcttcggcctgctgggtttcaatggagccggc
aaaaccacgactttcaaaatgctgaccggggaggagaccattacttctggggacgccttt
gttgggggctacagcattagctctgacatcgggaagatgcggcagcggattggctactgc
ccccagtttgatgccctgctggaccacatgacgggccgggagacactggtcatgtacgcc
cggctccggggtgtccccgagtgctacatcggtgcctgcgtggagaacacgctgcggggc
ttgctcctggagccgcatgccaacaagctggtcaggacgtatagcggcggcaacaagcgg
aagctcagcaccggcattgcccttcttggagagccagcagtcatcttcctggacgagccg
tccactggcatggaccccgtggcccggcgcctgctctgggacaccgtggcaagggcccgc
gagtctggaaaggccatcgtcatcacctcccacagcatggaggagtgtgaggccttgtgc
acccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccacagcacctc
aagagcaagtttggcagtggctactccctacgggccaagatccggagtgacaggcagcag
gaggccctggaagagttcaaggcattcgtggacctgaccttcccaggcagcgtcctggaa
gatgagcaccaagggatggtccattaccacctgcctggcaatgacctcagctgggcgaag
gtgtttggtgttctggagaaggccaaggagaagtatggcatggatgactactctgtgagc
cagatctcgctggagcaggtcttcctaagcttcgcccacctgcagccacctgttgaggac
gaggggccgtga
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