Globicephala melas (long-finned pilot whale): 115848167
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Entry
115848167 CDS
T11080
Symbol
MEFV
Name
(RefSeq) pyrin isoform X2
KO
K12803
pyrin
Organism
gmf
Globicephala melas (long-finned pilot whale)
Pathway
gmf04621
NOD-like receptor signaling pathway
gmf04623
Cytosolic DNA-sensing pathway
gmf05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115848167 (MEFV)
04623 Cytosolic DNA-sensing pathway
115848167 (MEFV)
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
115848167 (MEFV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115848167 (MEFV)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
115848167 (MEFV)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PYRIN
zf-B_box
DUF8104
CLIP1
Mua
Motif
Other DBs
NCBI-GeneID:
115848167
NCBI-ProteinID:
XP_060141268
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All DBs
Position
15:35421400..35435198
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AA seq
667 aa
AA seq
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MAKTRSDHLLYSLEELVPYDFEKFKFKLQNTSLEKEHSRIPRGQLQTAKPVKLATLLVTH
YGEEDAVRLTLQVLRAINQHLLAEELNGAIGPGCQVKESDTDSSAMSGSSGEKPKSLKIP
DGLEGDKQRQSGDGAGCPPSIQPEAGRGPQKKPLGKQRDQKGSERLDVQGKPGARNTTLS
SKRSPFPSKPQGEKGSNVGVRLRRNASSAGRLQGLSSGSFAGSLGRREFKISEAYLPSGK
KRPKSLEFTISSGETEPLNPETLMLQEKMRCENPGSAATLNTGATVAAEKGSRKPEHAMT
LEGVALRNTLSSVSLAGKKIWEHPESTVPAEKSGTEAPKTSKALEEVVGGVLHDPSNPEV
PPSSGRLQDKAVCPLCCAQEGDPVGGSCVHVSCSCPVASRDPEVSRGYSSSCPQCQDLLP
GKSHGSLEWQEGLQMASLSPKSLPQCERHMKQVQLLFCEDHGEPICLICGLSQEHRGHRV
RPIEEAALEYKKQIQKQLEHLKELRKSGEEQRSQGDKKTANFLKQAETQKQRIQYQLEQL
CQFLEQQEQLFVACLEELGQTIGQVRETYGTRVTGDIALLDKLIGELEAKQCQPEWELMK
DVRVTLHRAKKVTVPKLWATPPEVKEKIHLLYQKSEFVEKRMRHFLETLRSEMEMFNVPE
VTGDQAP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacccgtagtgaccatctgctgtactccctggaagagctggtgccctatgac
tttgagaagttcaagttcaagctgcagaacaccagcctggagaaggagcactcccggatt
ccccggggccaactccagacagccaagccagtgaagctggccactctgctggtcacccac
tatggggaggaggacgccgtgcggctgaccctgcaggtcctgagggccatcaaccagcac
cttctggcagaggagctcaacggtgcaatcggcccagggtgtcaggtaaaagaaagtgac
acagacagttcagcaatgtctggttcctctggggagaagcccaagagtctgaagatacca
gatggcctggaaggtgacaagcagcgacaaagtggtgatggggctggctgcccaccatcc
atccagcccgaggctggaagggggccccagaagaagcctctgggcaaacagagagatcag
aaaggctctgagcgcctggatgtgcagggcaagccaggggccaggaacacaactctgtct
tccaagagaagcccctttcccagcaagccacagggggagaaggggagcaatgtgggggtc
aggctgcgcaggaacgccagctctgcaggaaggctccaaggactctccagtgggtcgttt
gctgggtccctgggaaggagagaatttaagatatctgaagcatatttaccttcaggaaag
aagcgacccaaaagtcttgaatttaccatttcttcaggagagacagaacctctcaaccca
gaaactcttatgcttcaagagaaaatgagatgtgagaatccaggctcagcagccactctg
aacacaggggctactgtggctgcagagaaaggatccaggaagccagaacacgccatgact
ctggagggggtagcactcaggaatacactttccagtgtatcgttggctggaaagaagatc
tgggagcatccagagtccacagtacctgcagagaagagtggaactgaggctccaaagacc
tctaaggccttggaggaggtggtaggtggtgtgctccatgatccttcaaatccagaagtc
cctccatcttcagggagactgcaggacaaggctgtgtgtcccctttgctgtgcccaggaa
ggagacccggttggtggcagctgcgtgcatgtttcctgcagctgccccgttgcttctagg
gatcctgaggtctcacgtggctactcatccagctgccctcagtgccaggacttgctcccg
gggaagagccatggaagcctcgagtggcaggagggcctgcagatggccagcctgagcccc
aagtccctgccacagtgtgagcgtcacatgaagcaggtccagctgctcttctgcgaggac
cacggggaacccatctgcctcatctgcgggctgagtcaggagcaccgaggccaccgggtt
cgccccatcgaggaggccgccctggaatacaagaaacaaattcagaagcagctggagcat
ctgaaggagttgagaaaatctggagaggagcagagatctcagggggataagaagacagca
aacttcctgaaacaagctgaaacccagaagcagagaatccagtaccagttggagcagtta
tgccagtttttagagcagcaagagcagctctttgtggcctgtctggaggagctgggccag
accattggccaagtcagggagacatatggcacccgggtgacaggggacatcgcccttctc
gacaagctgattggggagctggaggccaagcagtgccagccagaatgggagcttatgaag
gacgtcagagtcaccctgcacagggccaagaaggtgactgtccctaagctgtgggccacc
cctccagaggtgaaagaaaagatccacctgctctaccagaaatcagagtttgtggagaag
cgcatgaggcacttcttggaaaccctgcgttcagaaatggaaatgttcaacgttccagaa
gtgactggtgatcaggcaccctga
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