Globicephala melas (long-finned pilot whale): 115848269
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Entry
115848269 CDS
T11080
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04371
Apelin signaling pathway
gmf04613
Neutrophil extracellular trap formation
gmf05034
Alcoholism
gmf05203
Viral carcinogenesis
gmf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115848269 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
115848269 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
115848269 (HDAC5)
05203 Viral carcinogenesis
115848269 (HDAC5)
09165 Substance dependence
05034 Alcoholism
115848269 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115848269 (HDAC5)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115848269 (HDAC5)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
115848269 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
115848269
NCBI-ProteinID:
XP_030704723
LinkDB
All DBs
Position
20:38979435..39015788
Genome browser
AA seq
1146 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMPGREPSLEILPRTPLHGLPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGVAAVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GALTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ
LGKILTKTGELPRQPTTHPEETEEELTEQQEAFLGEGALAIPREGSTESESTQEDLEEEE
EEEEEEEGEEEEEEEEEEEEEEEDCIQVKDEEGESGAEEGPDLEESSAGYKKVFADAQQL
QPLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQC
MCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP
LNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVA
TGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNG
TQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVE
YLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGG
RVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNVNAVATLEKVIEIQSK
HWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAGREHSPRPAEEPM
EQEPAL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggctcaggggcttgtggagatgctgcagaccatctatgagacg
gaatcctgtttctcagcagatgggatgccaggccgggaaccatccttggaaatcctgcct
cggacccctctacatggcctccctgtggcagtggaggtgaagccggtgctgccaggagcc
atgcccagctccatggggggcgggggaggaggcagccccagccccgtggagctgcggggt
gcgctggcaggccccgtggaccccgcgctgcgggagcagcagctacaacaggagctcctg
gcgctcaagcagcagcagcagctgcagaagcagctcctgttcgctgagttccagaaacag
cacgaccacctgacccggcagcatgaggtccagctgcagaagcacctcaagcagcagcag
gagatgctggcagccaagaggcagcaggagctggagcagcagcggcagcgggagcagcaa
cggcaggaggagctggagaagcagcggctggagcagcagctgctcatcctgcgaaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtgaagctgaggctccaggaattc
ctcctgtcgaagtcaaaggagcccacaccaggcggcctcaaccattccctcccacagcat
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
ccccctgggacgcctccctcctacaaactgcctttgcttgggccctacgacagccgtgat
gacttccccctccgcaaaacagcctccgaacccaacttaaaagtacgttcgaggctaaag
cagaaggtggccgagcggagaagcagtcccctcctgcgtcgcaaggacgggactgtcatt
agcacctttaagaagagagctgttgagatcacaggtgccgggcctggagtggcagccgtg
tgcaacagcgcgccaggctccggccccagctctcctaacagctcccacagcaccatcgcc
gagaatggctttactggctcagtccccaacatccccaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggctgcaggccacggtcactgtcaccaactcgcacctcaccgcctcc
ccaaagctttcgacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggt
ggtgcgctgacgggcaagttcatgagcacatcctctatccccggctgcctgctgggcgtg
gcactggagggcgacaccagcccccacgggcatgcttccctgctgcagcatgtgctgctg
ctggagcaggcccggcagcagagcaccctcattgctgtgccgctccacgggcagtccccg
ctggtgacgggtgagcgcgtggccaccagcatgcggacggtgggcaagctccctcggcac
cggcccctgagccgcactcagtcctcgccgctgccccagagcccccaggccctgcagcag
ctggtcatgcagcagcagcaccagcagttcctagagaagcagaagcagcagcagctgcag
ctgggcaagatcctcaccaagactggggagctgccacggcagcccaccacccaccccgag
gagacagaggaggagctgacagagcagcaggaggccttcctgggggagggggccctggcc
ataccccgagaaggctccacggagagtgagagcacacaggaagacctggaggaggaggaa
gaggaggaggaggaggaggagggagaggaggaggaggaggaggaggaggaggaggaggag
gaggaggaggactgcatccaggtcaaggatgaggagggcgagagtggtgctgaggagggg
cccgacttggaggagtccagtgctggttacaaaaaggtgtttgcagatgcccagcagctg
cagcctctgcaggtgtaccaggcgcccctcagcctggccactgtgcctcatcaggccctg
ggccgcacccagtcctcacctgctgcccctgggggcatgaagagccccccggaccagccc
accaagcacctcttcaccacaggtgtggtctatgacacgttcatgctgaagcaccagtgc
atgtgcggcaacacacacgtgcaccctgagcacgctggccggatccagagcatctggtct
cggctgcaggagacaggcctgctcagcaagtgtgagcggatccggggtcgcaaagccacg
ctggacgagatccagacggtgcactccgaataccacaccctgctctatgggaccagcccc
ctcaaccgacagaagctggacagcaagaagctgctcggccccatcagccagaagatgtac
gccatgctgccttgtgggggcatcggggtagacagtgacaccgtgtggaatgagatgcac
tcctccagtgccgtgcgcatggcggtgggctgcctggtggagctggctttcaaggtggcg
acgggggagctcaagaatggttttgccatcatccggcccccaggacaccacgcggaggag
tccacagccatgggattctgctttttcaactctgtagccatcacaaccaaactcctgcag
cagaagctgaatgtgggcaaggttctcatcgtggactgggacattcaccacggcaacggc
acccagcaagcattctacaacgacccctccgtgctctacatctccctgcatcgctatgac
aatgggaacttctttccgggctctggggctcctgaagaggttggcggagggccgggcgtg
gggtacaatgtgaacgtggcatggacgggaggtgtggatccccccatcggagacgtggag
tacctaacggccttcaggacagtggtgatgcccattgcccacgagttctcacctgacgtg
gtcctggtctccgccgggtttgatgctgtcgagggacacctgtctccgctgggtggctac
tcggtcaccgccagatgttttggccacttgaccaggcagctgatgacgctggcagggggc
cgggtggtgctggccctcgagggaggccacgacttgaccgccatctgtgatgcctctgag
gcctgtgtctccgctctgctcagcgtggagctgcagcccttggacgaggcagtcttgcaa
caaaagcccaacgtcaacgcagtggccacgctagagaaagtcatcgagatccagagcaaa
cactggagctgtgtgcagaggttcgctgctggtctaggccgttccctgcgggaggcccag
gccggtgagacagaggaggctgagactgtgagcgccatggccttgctgtcggtgggggcc
gagcaggcccaggctgctgcaggccgagagcacagccccaggccggcagaggagcccatg
gagcaggagcctgccctgtga
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integrated database retrieval system
