Globicephala melas (long-finned pilot whale): 115848440
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Entry
115848440 CDS
T11080
Symbol
LAMC2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04151
PI3K-Akt signaling pathway
gmf04382
Cornified envelope formation
gmf04510
Focal adhesion
gmf04512
ECM-receptor interaction
gmf05145
Toxoplasmosis
gmf05146
Amoebiasis
gmf05165
Human papillomavirus infection
gmf05200
Pathways in cancer
gmf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
115848440 (LAMC2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115848440 (LAMC2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115848440 (LAMC2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115848440 (LAMC2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115848440 (LAMC2)
09162 Cancer: specific types
05222 Small cell lung cancer
115848440 (LAMC2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
115848440 (LAMC2)
09174 Infectious disease: parasitic
05146 Amoebiasis
115848440 (LAMC2)
05145 Toxoplasmosis
115848440 (LAMC2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
115848440
NCBI-ProteinID:
XP_030705053
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Position
1:complement(47059189..47098982)
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AA seq
1173 aa
AA seq
DB search
MSFFALTLVCDCSGKSRQCVFDEELHRLTGNGFRCLHCSDNTGGVHCQRCKEGFYRQRDR
DRCLPCNCNSKGSLSARCDNAGRCSCKPGVTGDRCDRCLPGFHTLTEAGCTQDQRLLDSK
CDCDPAGISGPCDTGRCVCKSAVTGGRCDRCRPGYYHLDGGNPEGCTQCFCYGHSASCRS
SGDYSVHKITSTFHQDVDGWKAVQRNGSPAKLQWSQRHRDVFSSARQPDPVYFIAPAKFL
GNQQVSYGQSLSFDYRVDRGGRHPSAHDVILEGAGLRITAPLIPPGKTLPCGVTKTYTFR
LNENPSSNWSPQLSYFEYRRLLRNLTALRIRATYGEYSTGYLDNVTLISARPISGAPAPW
VEQCVCPVGYKGQFCQECASGYKRDSARLGPFGTCIPCNCQGGGACDPDTGDCYSGDENP
DIECADCPIGFYNDPRDPRSCKPCPCRNGFSCSVMPETEDVVCNNCPHGVTGARCELCAD
GYFGDPSGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCLHGTAGAHCDQCKAGYF
GDPLAPNPMDKCRACNCNPVGSEPVECRSDGSCVCKPGFGGLNCEHAALTICPACYNQVK
IQMDQFMQQLQNLETLISKAQGDGGAVPNTELEGRMQWVEQTLQDILREAQISEGAIRSL
NLQLAKARSQENSYRNRLDDLKMTVERVRALGSQHQNRVQDTHRLITQMRLSLEESEAAL
RNTDVLPSEDYMGPNGFKSLAQEAARLADSHVESANNMEQLARETEDYSEQALSLARKAL
SEGGGSGTLDGSVVQGLVGKLEKTKSLAQQLSREATQTDMEADTSYQHSLRLLNSASQLQ
GVNDQSFQVETKRIRQKADSVSSLVTKRVDEFKRVQSNLGNWEEETRKLLQNGKNGRQKS
DQLLSRANLAKSRAQEALSMGNATFYEVENILKNLREFDLQVEDRKAEAEEAMKRLSYIS
QKVADASDKTKQAETALGDAAADAQRAKNAAGEALEITGSIEQEMGSLNLEANVTADGAL
AMEKGLATLKSEMREVEGELARKEREFGTSTDAVQTVITEAQRVDNRARNAGVTIQDTLN
MLDGILHLIDQPGSMDEEGLVLLEQKLFQAKAQINSQLRPLMSKLEERASCQRGHLRSLE
TSIDGILADVKNLENIRDNLPPGCYNTQALEQH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttgccctgaccctagtctgtgattgcagtgggaagtccaggcaatgcgtg
tttgatgaggaacttcacagactgacaggaaatggattccgctgcctgcactgcagtgac
aacacgggtggcgttcactgccagaggtgcaaggaaggattttaccgccagagagacaga
gaccgctgtttaccctgcaattgtaactccaaaggttctcttagcgctcgatgtgacaat
gctggacgatgcagctgtaagccaggtgtgacaggagacaggtgtgaccgctgtctgcca
ggcttccacaccctcactgaggctgggtgcacccaagaccagaggctcctagactccaag
tgtgactgtgatccggctggcatctcggggccctgtgacacaggccgctgtgtctgcaag
tcagctgtcaccggagggcgctgtgataggtgccgaccaggttactatcacctggatggg
ggaaaccctgagggctgtacccagtgtttttgctacgggcattcagccagctgccgaagc
tctggagactacagtgtccataaaatcacctctaccttccatcaagatgttgatggctgg
aaggctgtccaaagaaatgggtctcctgcaaaactccaatggtcacagcgccatcgagat
gtgtttagctcagcacgacagccagaccctgtctattttatagctcctgccaaatttctt
gggaatcaacaggtgagctatgggcagagcctgtcttttgactaccgtgtggacagggga
ggcagacacccatccgcccatgacgtgatcctggaaggtgctggtctacggatcacagct
cccttgattccacctggcaagacactgccttgtggggtcaccaagacttacactttcaga
ttaaatgaaaatccaagcagtaattggagcccccagctgagttactttgagtatcgcagg
ttactgcggaacctcacagccctgcggatccgagctacctatggagaatacagtactggg
taccttgacaatgtgaccctgatctcagctcgccccatctctggagccccagcaccatgg
gttgaacaatgtgtgtgtcctgtcgggtacaagggacagttctgccaggaatgtgcttct
ggctacaaaagagattcagccagactgggaccttttggcacctgtattccatgtaactgc
caaggaggaggggcttgtgatccagacacaggagattgttattcaggggatgaaaaccct
gacatcgagtgtgccgactgccccattggtttctacaacgacccgcgtgacccccgcagc
tgcaagccctgcccctgtcgcaatgggttcagctgctccgtgatgccagagacagaggat
gtggtgtgcaataactgtccccacggtgtcactggtgcccgctgtgagctctgtgccgat
ggctactttggggacccctctggggaacacggcccagtgaggccttgtcaaccctgtcag
tgcaacaacaacgtggaccccagtgcctctgggaactgtgaccgcctgacgggcaggtgt
ctgaaatgcctccacggcacagccggtgcccactgcgaccagtgcaaagcaggctacttc
ggggaccccttggctcccaacccaatggacaagtgtcgagcttgcaactgcaacccagtg
ggctcggagcccgtggagtgtagaagtgatggcagctgtgtttgcaagccaggatttggc
ggcctcaactgtgagcatgcagcattaaccatctgtccagcttgctataatcaagtgaag
attcagatggatcagtttatgcagcagctccagaacctggagaccctgatttcaaaggct
cagggtgacggtggagcagtacctaacacagagctggagggcaggatgcagtgggttgag
cagacccttcaggacattctgagagaagcccagatttcagaaggtgctattagatccctc
aatctccagttggccaaggccaggagccaagagaatagctaccggaaccgcctggatgac
ctcaagatgactgtggaaagagttcgggccctgggcagccagcatcagaaccgagttcag
gatactcacaggctcatcactcagatgcgcctgagcctggaggaaagtgaagctgccctg
cgaaacaccgacgttcttccctcagaggactatatggggccaaacggctttaaaagtcta
gctcaggaggccgcgagactggcagacagccacgttgagtcagccaataacatggagcaa
ctggccagggaaaccgaggactactccgaacaagccctatccttggcgcgcaaggctctg
agtgaaggaggcggaagcggcacgctggacggctctgtggtgcaagggcttgtgggaaaa
ttggagaaaaccaagtctctggcccagcagttgtcaagggaggccactcaaactgacatg
gaagcagatacgtcttatcagcatagtctccgccttctcaattcagcatctcagcttcag
ggggtcaatgatcagtcctttcaggtagaaacgaagaggatcagacaaaaagctgactct
gtctcaagcctggtgactaagcgtgtggatgagttcaagcgtgtgcaaagcaatctggga
aactgggaagaagaaacccggaagctcttacagaatgggaagaatgggagacagaaatca
gatcaactgctttcccgtgccaaccttgctaaaagcagagcccaagaagcactaagtatg
ggcaatgccactttttatgaagttgagaacatcttaaagaacctcagagagtttgacctg
caggttgaagacagaaaagcagaagctgaagaggccatgaagagactctcctacatcagc
cagaaggttgcagatgccagcgacaagaccaagcaagcggaaacagccctgggcgatgct
gctgccgacgcccagagggcaaagaacgcagccggggaagccctggagatcaccggcagc
atagaacaggagatggggagcctgaacttggaggccaacgtgacagcagatggagccttg
gccatggagaagggactggccactctcaagagtgagatgagggaagtggaaggagagctg
gcaaggaaggagcgggagttcggcacgtctacggatgcagtgcagacagtaatcacagaa
gcccaaagagttgataacagagccaggaatgctggagttacgatccaagacacgcttaac
atgttggacggcatcctacacctaatagaccagcctggcagtatggatgaagaggggctg
gtcttattggagcagaagcttttccaagccaaggcccagatcaacagtcagctgcggccg
ttgatgtcaaagctggaagagagggcaagctgtcagaggggccacctccgttcactggag
acgagcatagatgggattctggctgatgtgaagaacctggagaacattagggacaacctg
cccccaggctgctacaatacccaggctcttgagcagcactga
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