Globicephala melas (long-finned pilot whale): 115848454
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Entry
115848454 CDS
T11080
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115848454 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmf03032
]
115848454 (POLA1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115848454 (POLA1)
DNA replication proteins [BR:
gmf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
115848454 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
115848454
NCBI-ProteinID:
XP_060148845
LinkDB
All DBs
Position
X:complement(105215279..105522504)
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AA seq
1468 aa
AA seq
DB search
MALAYGDDCELGASAVSDSGSFVTSRSRREKKSKKGRQEALERLKRAKAGEKYKYEVEDF
TSVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDHALDSHEKGKNNK
ACSKDKRNVKKAMVTKPNSIKSMFIASAGRKTADKAVDLSKDDLLGDILQDLNTETPQIT
PPPVIIPKKKGSSGASLNPFSMHTPKAAPSGKTTSPVSRKEPSLTPAPLKCAGFAGEPVL
ALRTVDQEESGAMDFEDGDFDEPMETEEVDVEPVGAKTSDQEREPAEGTKHEADPGKGTI
SYSASFLPDVSCWDIDQEDDSSFSALEVQVDSSHLPLVKGADEEQVFQFYWLDAYEDPYS
QPGVVFLFGKVWIEFAQTHVSCCVMVKNIERTLYFLPRETKIDLNTGKESGTPVTMKDVY
DEFDEKIAAKYKIMKFKSKAVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLKGETFS
HVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAVALKPDLVNVIKDVGP
PPLVVMSLSMKTMQNAKTHENEIIAVAALVHHSFALDKAPPRPPFHSHFCVVSKPKDCIF
PYHFKEGIKEKNVKVEVAATERTLLGFFLAKIHKIDPDIIVGHNIYGFELEVLLQRINVC
KVPYWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQ
ILKTERVVIPMENVRNMYSDSSRLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEDIDGDTNKYKKGR
KKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGE
QEQIPELPDPSLEMGILPREIRKLVERRRQVKQLMKQQDLNPDLVLQYDIRQKALKLTAN
SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTN
LEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTVDGNYVTKQEV
KGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTGSQRAYA
PEQLQKQDNLSIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDATQFRVHHYHRD
EENDALLGGPAQLTDEEKYRDCERFKCPCPICGTENIYDSVFDGSGTDMEPSLYRCSNID
CKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTCRNRTRHLPLQFSRNGPLCQVC
MKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLITDHEKDKLKKQFFTPKVLQDYRKLK
NTAEQFLSQSGYSEVNLSKLFADCAVRS
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcgtacggcgatgactgcgagctgggggcgagcgctgtgtcagattcaggg
agttttgtaacttctcgatcccggagagagaagaaatcaaagaaagggcgacaggaagct
ctggaaagactgaaaagggctaaagctggtgagaagtataaatatgaagtagaggacttc
acaagtgtttatgaagaagttgatgaggaacagtactcgaagctggtccaggcccgccag
gatgacgactggatcgtggatgatgatggtattggctatgtggaggatggccgagagatt
tttgatgatgaccttgaagatcatgcccttgattcccatgagaaaggaaaaaataataaa
gcatgcagcaaagacaagaggaatgtcaagaaggccatggtgacaaaaccgaacagtatc
aagtcaatgttcattgccagtgctggaaggaaaaccgcagataaagctgttgacttgtcc
aaggatgatctgctaggtgatattctacaggatttgaacactgagacacctcagataact
ccaccacctgtaataataccgaagaagaaaggatccagtggagcttcactgaatcctttc
tctatgcacacccccaaggcagctccttcaggaaaaaccacttccccggtctcaaggaag
gagccttcattaacccctgcccctcttaaatgtgctggatttgctggagagccggtgctg
gcattgcgtacagttgaccaggaggagtcaggggcaatggattttgaagatggcgacttt
gatgagcccatggaaacggaggaggtggatgtggagccggtgggtgccaagacctccgac
caagagagggagccagcagaggggacaaaacatgaggcagatcctgggaaagggaccata
tcctactcagcaagttttctcccagatgtctcttgttgggacattgatcaggaagatgac
agcagtttctcagccctggaagttcaagtggattccagtcacctcccactggtaaaaggg
gcagatgaggaacaagtatttcagttttattggctggatgcttatgaagatccgtacagc
caaccaggtgtggtgtttctatttggcaaagtttggatcgaattcgcccaaacccatgtg
agctgttgtgtcatggtgaaaaacattgagcgaacgctctacttccttccgcgtgaaacg
aaaattgatctaaatacagggaaagaaagtggaactccagttacaatgaaggatgtttat
gatgaatttgatgagaaaatagcagcaaaatataagattatgaaattcaagtccaaggca
gtggaaaagaactatgcttttgagatacctgatgttccagagaagtcggagtacttggaa
gttagatactcggctgaaatgccacagcttcctcaggatttgaaaggagaaactttttct
catgtatttgggaccaacacatccagcttggaactgttcttgatgaacagaaagatcaaa
ggaccttgttggctcgaagtaaaaaatccacagctcttgaatcagccaatcagttggtgt
aaagttgaggcagtggccttgaaaccggacctggtgaacgtaattaaggacgttggtcct
cctccacttgtggtcatgtctttgagcatgaagacaatgcagaatgcaaagacacatgaa
aacgagattattgctgtggcagcattggtgcatcacagcttcgcactagataaagcaccc
ccacggcctccctttcactcacacttctgtgttgtgtctaaaccaaaggattgtattttt
ccatatcattttaaagaaggcattaaggaaaagaatgtgaaggttgaggttgctgcaaca
gaaagaacactgctaggttttttccttgcaaaaattcacaaaattgatcctgatatcatt
gtgggtcataatatttatgggtttgaactggaagtgctacttcagagaattaatgtgtgc
aaagttccttactggtccaagataggtcggctgaagcgatccaacatgccaaagcttggg
ggcaggagtggatttggtgaaagaaatgctacctgtggccgaatgatctgtgatgtggaa
atttcagcaaaggaattgattcgttgtaaaagctaccatttgtctgaacttgttcaacag
attctgaaaactgaaagggttgtaatcccaatggaaaatgtacgaaatatgtacagtgac
tcttctcgtctgttgtacctgttggaacacacctggaaagatgccaggttcattttgcag
atcatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtctaggacgctgatgggtggacgatccgagcgtaatgagttcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaagcctcagcaa
aaaccgggagatgaagatgaagacattgatggagataccaataaatacaaaaaaggacgt
aagaaggcagcttattctggaggcttggtattggaccccaaagttggtttttatgataag
ttcattttgcttctggacttcaacagtttgtatccttccatcattcaggaattcaacatt
tgttttacaacggtgcaaagagttgcttcagaggcacagaaagttacagaggatggagaa
caagaacagatccctgagctgccagatccaagcctggaaatgggcattttgcccagagag
atccggaaactggtagagcggagaagacaagtcaaacagctaatgaaacagcaagattta
aatccagaccttgtccttcagtatgatattcgacagaaggctttgaagctcacggcaaac
agtatgtatggctgcctgggattttcctacagcagattttatgccaaaccactggctgct
ttggtgacatacaaaggaagggagattttgatgcatacgaaagagatggtgcagaagatg
aatcttgaagttatttatggagatacagattcaattatgatcaacaccaatagcaccaat
ctggaagaagtgtttaaattgggaaacaaggtgaaaagtgaagtgaataagttgtataaa
ctacttgaaatagacattgatggcattttcaagtccctgctactgctgaagaaaaagaag
tacgctgctctggttgttgagccaacagtggatgggaattacgtcaccaaacaggaggtg
aaaggattagatatagttagaagagattggtgtgatcttgctaaagacactggaaacttt
gtcattggccagatactttcggatcaaagccgggacaccatagtggaaaacattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcgttgacaaaggatccccaggattatcctgataaaaaaagcctacctcat
gtacatgttgccctctggataaattctcaaggaggcagaaaggtgaaagctggagatact
gtgtcgtatgtcatctgtcaggatgggtcaaacctcactgggagtcagagggcctatgca
cccgagcagctgcagaagcaggacaatttaagcattgacacccagtactacctggcccag
cagatccacccagttgtggctcgaatctgtgagccaatagatggaattgatgctgtcctc
attgcaacgtggttaggacttgacgccacccaatttagagttcatcattatcacagagat
gaagagaatgatgctctccttggtggcccagcacagctcacggatgaagagaaatacagg
gactgtgaaaggttcaaatgtccatgccctatatgtggaactgagaatatttatgatagc
gtcttcgatggttcgggaaccgatatggagcccagcttgtatcgttgcagtaacatcgat
tgtaaggcttcgcctctgacctttatggtacagctgagcaacaaattgatcatggacatt
agacgatgcattaaaaaatactacgaaggctggttgatttgtgaggagccaacatgtcga
aatcgaactcggcaccttccccttcagttctcccgaaatggacctctttgccaagtctgc
atgaaagctacacttcgaccagagtattctgataagtccctgtacacccagctgtgcttt
taccggtacatttttgatgcggagtgtgcactggagaaacttattaccgatcatgagaaa
gataagttgaagaagcagttttttactcccaaagttcttcaggactatagaaaactcaag
aacacagcagagcagttcttgtcccaaagtggctactccgaagtgaatctcagcaaactc
tttgccgattgtgctgtgcggtcctga
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