Globicephala melas (long-finned pilot whale): 115848484
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Entry
115848484 CDS
T11080
Symbol
RPN1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00510
N-Glycan biosynthesis
gmf00513
Various types of N-glycan biosynthesis
gmf01100
Metabolic pathways
gmf04141
Protein processing in endoplasmic reticulum
Module
gmf_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115848484 (RPN1)
00513 Various types of N-glycan biosynthesis
115848484 (RPN1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115848484 (RPN1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
115848484
NCBI-ProteinID:
XP_030705112
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Position
11:complement(1691781..1709253)
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AA seq
619 aa
AA seq
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MGHPRPSSVTAMEAPAARLLPLLLLIWAWAPAPGRASAEAPPLINEDVKRTVDLSSHLAK
VTAEVVLAHAGGSSSPRVASFLLALEPELEARLAYLGVQVKGEDEEENNLEVRETKIKGK
SGRFFTVKLPVALDPGAKVSVIVEAVYTHVLQPYPTQITQSEKQFVVFEGNHYFYSPYPT
KTQTMRVKLASRNVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHSENNSPFLTIT
SMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGVSSIRSFKTILPAAA
QDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQ
YALKMRLVDHVFDEQVIDSLTVKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPV
IVAHKKNLVEQHIQDMVVHYTFNKVLMLQEPLLVVAAFYVLFFTVIVYVRLDFSITKDPA
AEARMKVACITEQVLTLVNKRLGLYRHFDETVNRYKQSRDVSTLNSGKKSLETEHKALAS
EVALLQSRLKTEGSDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKL
ISGKRQELVTKIDHILDAL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgggccacccgcggcctagctcagtcacggccatggaggcgcccgcagctcgcctgctg
ccgctgctgctgctgatctgggcctgggctccggcgccgggccgcgcctccgcggaggcg
ccgccgctgatcaacgaggacgtgaagcgcactgtggacctgagcagccacttggccaag
gtgacggccgaggtggtcctggcgcacgcgggcggtagctcctcgccccgcgtcgcctcc
ttcctactggctctggagcccgagctggaggcgcggctggcgtacctcggcgtgcaggtg
aagggagaggatgaggaagagaacaatctggaagtacgagaaaccaaaattaagggtaaa
agcgggagattcttcaccgtcaagctcccagtcgctcttgatcccggggccaaggtttca
gtcattgtggaagccgtttatacccatgtgcttcagccatatccaacccagatcacccag
tcggagaaacagtttgtggtgtttgaggggaaccattatttctactctccctacccgacc
aagacacaaaccatgcgtgtgaaactcgcctcccgaaacgtggagagctacaccaagttg
gggaaccccacgcgctccgaggacctcctggattacggacctttccgcgatgtccctgcc
tatagtcaggacacttttaaagtacattctgagaacaacagccctttcctgaccatcacc
agcatgacccgagtcatcgaggtctcccactggggtaacattgctgtggaggaaaacgtg
gacctgaagcacacaggggctgtgctgaaggggcctttttcgcgctatgattaccagaga
cagccagatagtggagtctcctccatccgttcttttaagaccatccttcctgctgctgca
caggatgtttattatcgggatgagattggcaatgtttccaccagccaccttcttattttg
gatgactccgtagagatggaaatccggcctcgctttcctcttttcggcgggtggaagacc
cattacatcgtcggctacaacctcccaagctatgagtacctctataatttgggagaccag
tatgcattgaagatgaggcttgtggaccacgtgtttgatgaacaagtgatagactctctg
actgtgaaaatcatcctgccagaaggggccaaaaacatccaagtggacagtccctatgag
atcagccgagcccctgatgagctgcactacacctacctggacacgtttggccgccccgtg
atcgtggcccacaagaaaaacctggtggagcagcacattcaggacatggtggtacactac
accttcaacaaggtgctcatgctgcaggagcccctgctggtggtggctgccttctacgtc
ctgttcttcaccgtcatcgtctacgtcaggctggacttctccatcacaaaggatccggct
gcagaagccaggatgaaggtggcctgcatcacagagcaggtcttgaccctggtcaacaag
agactaggtctctaccgtcactttgatgagacagtcaataggtacaaacagtcccgggac
gtgtccaccctcaacagtggcaagaagagcctggaaacggagcacaaggccttggcctct
gaggtggcgctgctgcagtccaggctgaagacggagggctccgacctgtgcgacagagtg
agcgaaatgcagaaactggacgcgcaggtcaaggagctggtactgaagtcggcagtggag
gccgagcggctggtggctggcaagctcaagaaagacacgtacatcgagaacgagaagctc
atctcgggaaagcgacaggagctggtcaccaagatcgaccacatcctggatgccctgtag
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