Globicephala melas (long-finned pilot whale): 115848517
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Entry
115848517 CDS
T11080
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115848517 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115848517 (DTX4)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115848517 (DTX4)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115848517 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
WWE_5
zf-RING_5
zf_RING_Vps8
zf-ANAPC11
PHD_NSD
zf-RING_16
zf-RING_Vps41
PHD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
115848517
NCBI-ProteinID:
XP_030705153
LinkDB
All DBs
Position
8:complement(11012092..11046118)
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AA seq
619 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDSRLAPYIIDL
QSMNQFRQDTGTLRPVRRNYYDPTSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQ
HPWIDLTSIGFSYIIDFSTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKPQSWPASPGP
AAAPPAAPCSCPQCVLVMSVKAAVANGSAGPLQPPAARKHMPESGVVKMPPPPGPGAKPL
DSTGTIRGPVKMVPSQAIRRQASSTPAGANAVSPASPPGANGKTGRVALATLNRTNLQRL
AIAQSRVLIASGVPTVPVKNLSGSSPVNPALAGITGILMSAAGLPVCLTRPPKLALHPPP
VSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPS
GYKGPQPTVKPDLVGKLSRCGHIYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPP
GKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKG
RKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNV
LAELAAQGISEDSTAQEKD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggcctcggccgtggtggtctgggaatggctgaacgagcacggccgctggcgt
ccctacagcccggccgtgagccaccacatcgaggcggtggttcgcgccggcccccgcgcc
gggggcagcgtggtgctgggccaggtggacagccgtctcgcgccctacatcatcgacctg
cagtccatgaaccagtttcgccaggacaccgggaccctccgtccggttcgccgcaactac
tacgacccgacctcggcccctgggaagggcgtggtgtgggagtgggagaacgacaatggt
tcttggacgccctacgacatggaagtgggcatcaccatccagcacgcctacgagaagcag
cacccctggatcgacctcacttccatcggcttcagctacatcattgatttcagcaccatg
ggccagatcaaccggcagacccagcgccagcgccgcgtccgccggcggctggatcttatc
taccccatggtcactggcaccttgcccaagccccagtcctggccggccagccccgggcct
gccgccgcgccgcccgccgcgccctgctcctgcccgcagtgcgtcctggtgatgagcgtc
aaggccgcggtggccaatgggagcgccggacccctgcagcccccggctgcccgcaagcac
atgcccgagtctggagtggtcaagatgcctcccccaccaggccccggggccaagccactg
gacagcacgggcaccattcgaggcccggtgaagatggtcccatcgcaggcgatccggcga
caagcctccagcacgccggcaggggcgaatgcggtctcccctgctagccccccgggagcc
aatggcaagaccggaagggtggccctggcgaccttgaatcggaccaacctgcagcgactg
gccatcgcccagtcccgggtgctgatcgcctccggggtccccactgtcccagtgaagaac
ctaagtgggtccagtcctgtcaacccagccttggcaggaatcactgggatcctcatgagt
gcggcagggctgcctgtgtgtctcaccaggccaccaaagctggccctccacccacccccc
gtcagcaagagtgaaataaagtccatcccaggggtttccaacacaagccgcaagaccacc
aagaaacaagccaagaaaggtaaaaccccagaagaggtgctgaagaagtatctgcagaaa
gtccggcatccaccagacgaggactgcaccatctgtatggagcgcctcacagccccctca
ggctacaaggggccacagccgacggtcaagcctgacctagtgggtaagctgtccagatgc
ggccacatctaccacatctactgcctggtcgccatgtacaacaacggcaacaaggacggg
agtttgcagtgtccaacctgtaagaccatttatggggtgaagacaggcacccagcctcca
gggaagatggagtaccacctcattccccactctctgcctggccacccagactgcaagacc
atccgaatcatctacagcatcccccctggcattcaggggccagaacacccaaatcctggg
aaaagtttcagcgcccgtggcttcccacgacactgttaccttccagacagcgagaagggg
agaaaggtcctgaagctgctgcttgtggcctgggatcgccgtctcatctttgccatcggt
acgtccagcaccacgggcgagtcagataccgtcatctggaatgaggtccatcacaagaca
gagtttggctctaatctcactggccacggctacccagatgccaattacctggataacgtg
ctggctgaactggctgcccagggcatttctgaggacagtactgcccaggagaaggactga
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