Globicephala melas (long-finned pilot whale): 115848762
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Entry
115848762 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: POM121-like protein 2
KO
K14316
nuclear pore complex protein Nup121
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115848762
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115848762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115848762
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115848762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
115848762
NCBI-ProteinID:
XP_030705545
LinkDB
All DBs
Position
11:81376828..81379882
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AA seq
1017 aa
AA seq
DB search
MGTYVGKLGLWPSSPAGGRTDLSERPLNRRPAQSLHQVPWVQHVHRAHPAPRHRPARSLP
NWDPTSPNACVVNEAWRPFPMNRPRNSITGPLPSDWWGSYFKGSIWSLRHPRATRSPVTR
RLAPRERTAPPSTAPAEVTNSAGVSPSEKXPDPCAKETVLRALRECKKGKVRWEESLVPE
SLDSKRIPETRPSVFKPLTKNGVLTSFVPRPGPLKRSLDCWGSDHSLNNRPSCSSMDSLA
SAHTGGPLSSQRNAITSSYSSSRDFSEPWKSIPSTSLQIPEWPMKRKEHWHPSHSPAPLV
SDESPETSGSSGQQNQVPLLLSSPGSLLSLTPPTQLGYAVPKDLALGKKAGLQRSNKARE
DTTEVTTDSVPDTWSAIQPPLSQGTDPQLESLHKMQESPSPLAFPQPTGEAISVAHSPLK
TASLLASHGCSQSEPLSGTSSDSKPTTTFILLTLVSPTAPVTETTWPXSTSQAAVPRGSP
AINPAAPTMQSTVFGLMSSPAPHLPASAPPVATSADRMSKPILGLPANSEIRVSSYSRIS
STAAASSPPGISTPTFKPIFGSIRPLKTMPVRAPFSFKQTSPPPTPASTRLFHGLVKATS
VVMSTTPASTSKGSFKPPLEFGVVNVTSTMGSTCSSPSTCPPFPLGAACAFRASFSPDAD
FTFPLSQRPTIPTVHTVTIFSQVLPSAVQISPTRSTADFSAVGGPPAASALVTTNQPALS
SRISSSKSAFTIPLESSSRPPSPLTLGATPQPAFGAAYVQKQEAPQPALGPSFCSSPIFG
NSTVASSTPTPTPAQPSFSGTTQSASAGLAPPASTFHIPASFRPAFDSTPVGSLWSNTNG
LGVVTPSHRTGACGSVFGSTAPRPFDFGELVSPVDCEETELSVTAPDASSSSGALSPGAV
PSGSTNTITPLGKGWGPGSQGRTSQGTPLALGKASISARETMFGDTSMASFAQSTPVIGS
VKAGSSLGFGMPSPPPQGSVGRRSFRLSAPLFPIGAKSKTPKNREQGYSRRHHAHKK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttacgtgggcaagctgggactctggccgtcatccccagcaggggggcgcaca
gacttgtcggagaggcccttgaaccgccggccagctcagtcccttcatcaggtcccctgg
gttcagcacgtccatcgtgcccaccctgcccctcggcacagacctgcgaggagcctgccg
aactgggatcctaccagtcccaacgcgtgcgtggtcaatgaggcttggaggccctttccc
atgaacaggccccggaattccatcacggggcctcttccctcagactggtggggaagttac
ttcaaggggagtatctggtctcttcggcaccccagggcaacaaggagcccggtgaccagg
aggctcgctcctcgtgagcggacagcgcccccctccactgccccagcagaggtaacgaac
tctgcaggggtctcaccttctgagaagnccccagacccatgtgcgaaggagacagtgctg
agggccctcagagagtgcaagaaggggaaagtgaggtgggaagaatcacttgttccagag
agcttggacagtaagaggattccagagaccagaccatctgtgtttaagcctctgacgaaa
aatggagtcctcacttcttttgtgccgaggcctgggcctctgaagagaagcctcgactgc
tggggctcagatcacagcttgaataacaggcccagctgctcctccatggactccttggcc
agcgcacatacaggtggcccccttagctcccaaagaaatgctattacaagctcttacagc
tcttctagagatttctctgagccttggaagagtattcccagtacatcactccagatacca
gagtggccaatgaaaaggaaagaacattggcatccgtctcactctccagccccactggta
tcagatgagtccccagaaacatctggcagctctgggcagcaaaatcaggttcccctgctt
ctgtcaagccccgggagcctgctgtccctgactccgccaactcagctgggttatgcagtc
cccaaagacctggccttagggaagaaagctggactccaacggagcaacaaagccagagaa
gatacgactgaggtcaccacagactctgtccctgacacttggtctgctattcagcctccc
ctgtcccagggcactgatcctcagctggaaagcttacataaaatgcaggagtctccaagt
cccctggccttcccacaacctaccggagaggcaatcagtgtggcccactcgcctctgaag
acagcgagcctgctggcctcacatgggtgctcccagtcagagcccctttcaggcacctct
tcagactcaaaacccaccactactttcatcctcctgacccttgtttcccccacagcacca
gtcactgagaccacgtggccancttcaacctctcaggctgccgtaccccgaggctcacct
gccattaaccctgcagcacccactatgcaaagtactgtgtttggattgatgagcagccca
gccccccatcttcctgcatctgcacctcctgttgcaacttctgctgaccgcatgtcaaaa
cccatcttggggctcccagccaatagtgagatcagagtctcctcatattccagaatttca
agcacagctgcagcatcttcacctccgggtatctcaactcccaccttcaagcctatcttt
ggcagcataagaccacttaaaactatgcccgtgagagctcctttctctttcaagcagacc
tctcctccacctactcctgcttctacccgtctcttccatggcctggtcaaggctacctct
gtagtcatgtccaccaccccagccagcacatccaaaggctcctttaagccgcctttggag
tttggtgtagtgaatgttaccagtaccatgggcagcacttgctccagcccttccacttgc
cccccttttcctctcggggctgcctgtgctttcagggccagcttctccccagatgcagac
ttcactttcccactgagccagcgtccaaccattcctactgtgcacacagtcaccatcttt
agccaggttcttcccagtgctgtccagatatcccctaccaggagcactgccgattttagc
gctgtgggtggccctccggcagcttcagccctagtaaccaccaaccagcctgcattgtca
tccaggatctccagttcgaagtcagcattcacaattcccttggagtcaagctcaaggcca
ccttccccactaaccctgggagccactccccaacctgcatttggggctgcatatgtgcag
aagcaagaagccccccaaccagcccttggcccaagcttctgtagctctcccatttttgga
aactcaacagtggcctcctcaaccccaacaccgaccccagcccagccatccttcagcggt
accacgcagtcagcctctgcgggtttggcaccaccagcctccacctttcacatccctgcc
agcttccggccggcctttgacagcactccagtaggttccctttggtctaatacgaatggt
ttgggagttgtcaccccaagccaccggactggggcttgtggctcagtgtttggcagcaca
gccccacgaccatttgactttggggaattagtgagccctgtggactgtgaggagactgaa
ctcagcgtcactgccccagacgcgagctccagctccggagcactcagccctggagcagtg
ccgagtgggagcactaacaccatcacacccttggggaaaggctggggcccaggcagccag
ggccggaccagccagggcacacctttggccctggggaaggccagcatttctgcaagagaa
actatgtttggggacacatccatggcctcctttgctcagagcacccctgtcattggatca
gttaaggcaggcagcagccttggctttgggatgccctctccaccgccccagggctctgtt
gggagaagatctttcagactgtcagcccctttgtttcccattggtgcaaaatcaaaaacc
ccaaagaatcgggagcaagggtattcccgaaggcatcatgcccacaagaaataa
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