Globicephala melas (long-finned pilot whale): 115849036
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Entry
115849036 CDS
T11080
Symbol
NUP62
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115849036 (NUP62)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115849036 (NUP62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115849036 (NUP62)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115849036 (NUP62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Exonuc_VII_L
Nup188_C
Motif
Other DBs
NCBI-GeneID:
115849036
NCBI-ProteinID:
XP_030705768
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All DBs
Position
19:6721373..6746503
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AA seq
516 aa
AA seq
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MSGFNFGGTGAPTGGFTFGAAKTATTTPATGFSFSTSGTGGFNFGTPSQPAASTPSTSLF
SLTTQAPATQTPGFSFGTTTPTAGATGFSLGINSPKLNLSGTAATPATTQPSSFGLGGST
LTNAISSAVTSAQGTAPTGFVFGPTTTSAAPSTTPGGFSFTGGGTSQTGTSGFNIGSMGS
SAQPTALTGLPFTPATPVATGAGATQPAASAPTATTASAGPSLFASLANAPASSAATGLS
LCAPATTAGTPGVGTLGFSLKAPGAASTTSTATTTTATTATTGFSLNIKPLAPAGIPSNT
AASGTTPAGPSAATGVSTSPAMTYAQLESLINKWSLELEDQERHFLQQATQVNAWDRTLI
ENGEKITTLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEESVKEQSGTVYLQHA
DEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAHMDSLQ
WIDQNSALLQRKVEEVTKVCEGRRKEQERSFRITFD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtttaattttggaggcactggggcccccacaggcgggttcacctttggcgct
gcaaagacagcaacaaccacgcctgctacggggttttctttctccacgtctggcaccggc
gggtttaattttgggactccctcccagccagccgcgagcaccccttccaccagcctgttc
tcactcaccacccaggctccggcgacacagaccccaggattcagttttggaaccacaact
cctacagcaggagcaaccggattttccttagggatcaacagcccaaagctaaacttgagc
ggcacagctgccaccccagccacgacgcagcccagcagctttgggctcggcggcagcacc
ctcaccaatgccatctcgagcgccgtcacgtcagcccagggcacggcgcccaccggcttt
gtgtttggtcctaccaccacgtctgctgctccgtccaccacacctgggggcttctcgttc
acgggtggaggcacgtcccagaccgggacctccggcttcaacattggctccatggggagt
tcggcccagcccacggccctcaccgggctgcccttcacaccggccacgccagtggccact
ggagcaggggccacacagccggctgcttccgcacccaccgccactaccgccagtgctggg
ccctcgctctttgcctcgctggcaaacgctccagcctcgtctgctgccaccgggctctcc
ctttgtgccccagccaccacggcagggacgcccggagtggggacgttgggcttcagcctg
aaggcccctggagcagcttccaccacctccacggcaacgaccaccaccgccaccactgcc
accaccggcttctccttgaatataaaaccactggctccagctgggatccccagcaacaca
gcggcctccgggaccaccccagccggccccagtgcagccaccggggtgtccaccagcccc
gcgatgacctacgcccagctggagagtctgatcaacaagtggagcctggagctggaggac
caggaacggcacttcttacagcaggccacgcaggtcaacgcctgggaccgcacgctgatc
gagaacggggagaagatcaccaccctccaccgcgaggtcgagaaggtgaagctggaccag
aagaggctggaccaggagctcgacttcatcctgtctcagcagaaggagctggaggacctg
ctgagcccgctggaggagtcggtcaaggagcagagcgggacggtgtacctgcagcacgcc
gacgaggagcgagagaagacttacaagctggccgagaacattgatgcacagctgaagcgc
atggcccaggacctcaaggacatcatcgagcatctgaacacgtcagggggccccgccgac
accagcgacccgctgcagcagatctgcaagatcctcaacgcgcacatggactcgctgcag
tggatcgaccagaactcagccctgctgcagaggaaggtggaggaggtgaccaaggtgtgc
gagggacgccgcaaggagcaggagcgcagcttccgcatcaccttcgactga
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