Globicephala melas (long-finned pilot whale): 115849159
Help
Entry
115849159 CDS
T11080
Symbol
HDX
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115849159 (HDX)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115849159 (HDX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
PPV_E1_N
Motif
Other DBs
NCBI-GeneID:
115849159
NCBI-ProteinID:
XP_030706017
LinkDB
All DBs
Position
X:57700910..57878520
Genome browser
AA seq
695 aa
AA seq
DB search
MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKNSESGAATTGTVSGTPLAAPDVTVRNVVNIAPTSRQQSSWISPNNDVIVTGIYSPASS
SSRQGTTKHTNTQITEAHKIPSQKTASKNDTEFQLHIPVQRQVAHCKNASLLLGEKTIIL
SRQTSVLNAGNSVYNHTKKHYGSSSMQASELTVPQKPSVCHQPCKIEPVGIQRSYKPEHT
GLASHNLCGQKPPIRDPYCRTQNLEIREVFSLAVSDYPQRILGGNAPQKPPSSTEGTCLS
IAMETGDADDEYAREEELALMGAQIPSYSRFYESGSSLRAENQSTVLPRPGRNMPNSPMV
NIRDLSDNVLYQNREYHLTPRTSLHTASTTMYSNTNPSRSNFSSHFASSNQLRLSQNQNN
YQISGNLTVPWITGCSRKRALQDRTQFSDQDLATLKKYWDNGMTSLGSVCREKIEAVATE
LSVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSEQPESGSLSALTPGEEAGPEVGE
DNDRNDEVSICLSEGSSQEESSEVVLNEARAHKEENHHTVSSDNVKIEIIDDEESDMISN
SEVEQVNSLLDYKNEEVRFIENELEIQKQKYFKLQTFVRSLILAIKADDKEQQQALLSDL
PPELEEMDFNHASPEPDDTSFSVSSLSEKNASDSL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacgttctgtatttactgtagaacaacaaaggattttacagcgttattatgaa
aatggaatgacaaatcaaagtaaaaattgctttcagctcatattacagtgtgcacaggag
actaagctggacttcagtgtagtcaggacgtgggttggcaataagagaagaaaaatgagt
agtaagaattctgaatcaggagcagcaacaacaggaactgtttctggtactcctttggca
gctccagacgttacagtcagaaatgtggttaatattgctccaacctcaagacaacagtct
tcttggatatcacccaataatgatgtcattgtaactggtatatacagtccagccagttca
tcaagtaggcaagggacaaccaaacatacaaatacacaaattacagaagcacataaaatc
cctagtcagaaaacagccagtaaaaatgatactgagtttcagttgcacattcctgttcaa
agacaagtagcacactgtaaaaatgcctctctgctcttaggtgaaaaaacaattattttg
tccagacagacaagtgtgctaaatgctggaaactctgtatacaatcacacaaagaaacac
tatggaagctcttcaatgcaagcctctgagttgacggtaccacaaaagccatctgtgtgc
caccaaccttgcaaaattgaaccagtcggaattcaaagatcatataagcctgaacacacg
ggtctagcatcacataacttatgcgggcaaaagccacctattagagacccttactgcaga
acacaaaacttggaaatccgtgaagtattttcattggcagttagtgattacccccagaga
attctgggaggaaatgccccacagaagcctcctagttcaacagaaggaacttgtttgtcc
attgcaatggagactggagatgctgatgatgagtatgccagagaggaagagttggcattg
atgggagcacagataccaagctactcaagattttatgaaagtggcagttcccttcgagct
gagaaccaaagtacagttttgcccagaccaggaagaaatatgccaaattcaccaatggtg
aatattagagacttgtcagacaatgtactgtatcaaaacagagaataccatttgacacca
cggacctcattacatacagcatctactacaatgtacagtaatacaaatccatcacggagt
aatttttcttcacattttgcatcatcaaaccaattgaggttatcacaaaaccaaaacaat
taccagatttcaggaaaccttactgtgccttggattacagggtgttctagaaaaagagca
ctacaagaccgcactcagttcagtgaccaagacttagccacccttaagaagtactgggac
aatggcatgaccagccttggctctgtttgtagagagaaaattgaagcagtggcaactgaa
ttgagtgttgactgtgaaatagttcggacttggattgggaatcgaagaagaaaatatcgt
ttaatggggattgaagttccacctccaagaggaggccctgctgatttttctgagcagccc
gaatctggttctttatctgcactcacaccaggagaggaagctggtcctgaagtaggagag
gataatgacagaaatgatgaagtatccatctgtttgtctgaaggaagctcgcaagaggag
tccagtgaagttgttctaaatgaggcaagggctcataaggaggagaaccaccatacagta
tcctcagataatgtgaaaatagaaattattgatgatgaagaaagtgacatgataagtaat
tctgaagtagaacaagtgaattctctcttggattataagaatgaagaagtcagattcatt
gaaaatgaactagagattcaaaagcaaaaatattttaaacttcagacgtttgtaagaagc
ttgatactagctataaaagctgatgataaggaacaacagcaggcactgctgtcagattta
cctcctgaattagaagagatggatttcaatcatgcctcaccggagcctgatgatacctca
ttcagtgtgtcttctttatcagagaaaaatgcctcagacagtttgtga
DBGET
integrated database retrieval system
