KEGG   Globicephala melas (long-finned pilot whale): 115849408
Entry
115849408         CDS       T11080                                 
Symbol
RNF5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115849408 (RNF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmf04121]
    115849408 (RNF5)
Enzymes [BR:gmf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115849408 (RNF5)
Ubiquitin system [BR:gmf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115849408 (RNF5)
SSDB
Motif
Pfam: zf-C3HC4_3 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-ANAPC11 zf-C3HC4_4 Baculo_IE-1 zf_RING_Vps8 zf-UDP zf-RING_16 Rtf2
Other DBs
NCBI-GeneID: 115849408
NCBI-ProteinID: XP_030706486
LinkDB
Position
11:complement(79025946..79028349)
AA seq 180 aa
MAAAEEEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLEARPE
RQECPVCKAGISREKVVPLYGRGSQKPRDPRLKTPPRPQGQRPAPESRGGFQPFGDTGGF
HFSFGVGAFPFGFFTTVFNTHEPFRRGTGVDLGQGHPASSWQDSLFLFLAVFFFFWLLSI
NT seq 543 nt   +upstreamnt  +downstreamnt
atggcagcagcggaggaggaggacgggggccccgaagggccaaaccgcgagcggggcggg
gcgggcgcgaccttcgaatgtaatatatgtctggagactgctcgggaagctgtggtcagt
gtgtgtggccacctgtactgttggccctgtctccatcagtggctggaggcacggccagag
cggcaagagtgcccagtgtgtaaagctgggatcagcagagaaaaggttgtccccctttat
gggcgagggagccagaagccccgggatcccagattgaaaaccccaccccgcccccagggc
cagcgacccgctccagagagcagagggggattccagccatttggcgatactgggggcttt
cacttctcatttggtgttggcgctttcccctttggctttttcaccaccgtcttcaatacc
cacgagccattccgtcggggtacaggtgtggatctaggacagggtcacccggcctccagc
tggcaggactccctcttcctgtttctcgccgtcttcttctttttctggctgctcagtatt
tga

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