Globicephala melas (long-finned pilot whale): 115849737
Help
Entry
115849737 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04120
Ubiquitin mediated proteolysis
gmf05012
Parkinson disease
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115849737
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
115849737
05022 Pathways of neurodegeneration - multiple diseases
115849737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115849737
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115849737
Enzymes [BR:
gmf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
115849737
Ubiquitin system [BR:
gmf04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
115849737
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115849737
Exosomal proteins of other body fluids (saliva and urine)
115849737
Exosomal proteins of colorectal cancer cells
115849737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Collectrin
BilD_C
Motif
Other DBs
NCBI-GeneID:
115849737
NCBI-ProteinID:
XP_060149098
LinkDB
All DBs
Position
Y:5928821..6049251
Genome browser
AA seq
1140 aa
AA seq
DB search
MIRNRINNAFFLNDQTLEFLRIPSTLAPPTGPSVPVWIIIFGVMFCIIIVASMLLILSGI
WQHRRVTTNKREKPPRIWLLCLKMSTLPLLKKRCMSGPDPKASSDCPSACSVMFKVPSEP
TNGMPKTGSATDIDEGLYSRQLYVLGHEAMKHLQTSTVLVSGLRGLGVEIAKNIILGEVK
AVTLHDQGTAQWADLSSQFYLREEDIGKNRAEASQPHLAELNSYVPVTTYTGALVDDFLS
GFQVVVLTDSPLEDQLRVGEFCHSRGIKLVVADTRGLFGQLFCDFGEEMILTDSNGEQPL
SAMISMVTKDNPGVVTCLDEAXHGFESGDFVSFMEVQGMNELNGISPLEIEVLGPYTFSI
CDTSNFSDYVCGGVVSQIKVTKEISFKSLPTSLAEPDFVITDFAKYSRPPQLHIGFQALH
QFCAQHGQPPRPHNEEDATELVTLAQAVDARALPAVQQKSLDEDLIRKLAYVATGDLALI
NSFIGGVAAQEVMKACSGKFMPVMQWLYFDAIECLPEDQEAFTEDTCLPCQNRYDGQVAV
FGSGLQEKLGKQRYFLVGVGAVGCELLKNFAMIGLGCGEGGAVTITDMDTIEKSNLNRQF
LFRPWDIRKLKSDTAAAPVRQINPHIRVMSHQNCVGPHTERVYDDNFFQNLDGVANALDN
VDARTYMDRCCVYYRKPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNF
PNAIEHTLQWAWDEFEGLFKQPAENVNQYLIDSTFVEQTLYLEGTQRLEVLEAVQRSLVL
QRPYTWADSVTWAYYHWHTQYSNNIRQLLHNFPPNLLTSSGAPFWSGPKRCPHPLIFDVS
NPLHLDYVIAAANLFAQTYGLRGSQDRAAVTILIQSVQVPEFTPKSGVKIHVSDQELQTT
SCVDDNRLQELKAMLPSPESLPGFKMYPINFEKDDDSNFHMDFVVAASSLRAENYNIPPA
DRHKSKLIAGKIIPAIATTTAAIVGLACLELYKVVQGHQELESYKSSFINLALPFFSFSE
PLAPHHHQYYNQQWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLCQGRSMLY
SFFMTASKLKEQLDQPMTAIVRRVSKQKLGHHIQALVLELCCNDESGEGVEVPYVRYTIR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgattaggaaccggatcaacaatgccttctttttgaatgaccagactctggaattttta
agaattccttccactcttgcaccacctactggcccatctgtgcccgtctggattattata
tttggtgtgatgttttgcatcatcatagtggcaagcatgctattgattttgtcaggaatc
tggcaacatagaagagttaccactaacaaaagagaaaagcctccccgtatctggctcctt
tgtctaaagatgtccactttgccactattgaagaaacgttgtatgtctgggcctgatcca
aaagcaagttctgattgcccttctgcgtgttctgtaatgttcaaagtgccatcagaaccg
accaacggaatgccaaaaacaggcagtgcaacagacatagatgagggtctttactcccgg
cagctgtatgtcctgggccatgaggctatgaagcatctccagacttccactgtgctggtg
tcgggccttcggggcctaggggtggagattgcgaagaacatcatccttggtgaggtcaaa
gctgtcaccctccatgaccagggcactgcccagtgggctgacctctcatcccagttctac
ctaagggaggaggacatcggtaagaaccgggctgaggcatcacagccccaccttgctgaa
ctcaacagctatgtgcccgtcaccacctacactggggcccttgttgatgacttccttagt
ggtttccaggtggtggtccttaccgactctcctttggaggaccagctgcgggtgggtgag
ttttgtcacagccgtggaatcaagctggtcgtggcagacactcggggtctgtttgggcag
ttgttctgtgactttggagaggagatgatcctgacggattccaatggggagcagcctctc
agtgctatgatttctatggttaccaaggacaaccctggtgttgtaacctgcctggatgag
gcctgacacgggtttgagagcggtgacttcgtctccttcatggaagttcagggcatgaat
gaactcaatggcatctctcccctagagatcgaagtcctgggtccctacacctttagtatc
tgtgatacctccaatttctctgactatgtctgtggaggcgttgtcagtcagatcaaagta
actaaggagataagctttaaatccttgcccacctcactggcagagccagacttcgtgata
acagattttgccaagtattctcgccctcctcagctgcacattggcttccaggccctgcac
cagttctgtgcccagcatggccagccccctcggccccacaatgaggaggatgcaacggaa
ctggtgaccctagcacaggctgtggatgctcgagctctgccagcagtgcagcaaaagagt
ctggatgaagacctcatccggaagctggcttacgtggctactggggatctggcactcata
aattccttcattgggggcgtggctgcccaggaggttatgaaggcctgctctggaaagttt
atgcctgttatgcagtggctgtactttgatgccattgagtgtctccctgaggaccaagag
gcctttacagaggacacgtgccttccatgccagaaccgttatgatgggcaggtggctgta
tttggctccggcctgcaagagaagctgggcaagcagagatacttcttggtgggtgtgggg
gccgttggctgtgagctgctcaagaactttgccatgattgggctaggctgcggggagggc
ggggcagtcaccattacagacatggacaccatagagaaatccaatctgaatcgacagttt
ctgttccggccttgggatatcaggaaattgaagtctgatacagctgctgcacctgtgagg
cagataaatccacacatccgggtgatgagccatcagaactgtgtgggccctcacacagag
cgtgtgtatgatgataacttcttccaaaacctggatggtgtggccaatgccttggacaat
gtggatgcccgcacgtatatggaccgctgctgtgtgtactaccgtaagccacttctggag
tcaggcacactgggtaccaagggtaatgtgcaagtggttatccccttcctgacagagtca
tacagctccagccaggaccctcctgagaagtccatccccatctgcacgctgaagaacttc
ccgaatgccatcgagcacactttgcagtgggcttgggatgagtttgaaggtctcttcaag
cagccagcagaaaacgtcaaccagtacctaatagattcaacgtttgtggagcaaacactg
tacctggaaggcacccaacgcctggaggtgctggaggctgtgcagcgcagcctggtgctt
cagcggccatatacgtgggctgactctgtgacctgggcttactaccactggcacacccag
tactccaacaacatcaggcagctgctgcacaactttcctccgaacctgcttacaagctca
ggagcccctttctggtctgggcctaagcgctgtccacacccgctcatctttgatgtcagc
aatcccctgcatctggactacgtgatagctgctgccaacctgtttgcccagacctatggg
ctgaggggctctcaggaccgagctgctgtgaccatactcattcagtctgtgcaagtccct
gagttcaccccgaagtctggtgtcaagatccatgtttctgaccaggagctgcagaccact
tcctgtgttgatgataaccgcctgcaggagctcaaggccatgctgcccagcccagagagc
ctccctgggttcaagatgtaccccatcaactttgagaaggatgatgacagcaactttcac
atggatttcgttgtggctgcatccagtctccgggcggagaactataacattccccctgct
gaccggcataagagcaagttgattgcagggaagatcattccagccattgccacaaccaca
gcagctatagttggccttgcatgtctggagctgtacaaggtggtgcagggacaccaagag
cttgagtcctataagagcagcttcatcaacttggccctgccctttttcagcttctctgag
ccccttgccccacaccatcaccagtactataaccagcagtggacattgtgggatcgcttt
gaggtccaggggctgcagcctaatggtgaagagatgaccctcaagcagttccttgactac
tttaagacagagcacaagttagagatcaccatgctgtgccaaggtagatccatgctctac
tcctttttcatgacagcaagcaagctcaaggaacagttggatcagccgatgacagcaata
gtgagacgagtatcaaagcaaaagctgggacaccacattcaagcactggtgcttgagctg
tgctgcaacgacgagagcggcgagggtgtggaggtcccctatgtacgatacaccattcgc
tga
DBGET
integrated database retrieval system
