Globicephala melas (long-finned pilot whale): 115849822
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Entry
115849822 CDS
T11080
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115849822 (AFF2)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115849822 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
115849822
NCBI-ProteinID:
XP_060148330
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Position
X:complement(5505145..6004788)
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AA seq
1301 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKREWERRNQEVQQEDDLFSSGFDLFGEPYKVAEY
TNKGDALANRVQNTLGNYDEMKDLLTNHSNQNHLVGIPKNSVPQTPINKNEPSFFPEQKN
RMIPPHQDSTHSSAPMPPPSVVILNSTLIHSNRKSKPDWPRDSQNTSMVPASQAGSQPNK
TQPPTQDQPPARLEDFFVYPAEQPQVGAAEESNPSAKEDGNLKSGGGDTFKEIFQSSSPE
ESEFTLQAPGSPLVASSLLAPSSGLVVQNFPPGVYCKTSVGQQKPTAYVRPMDGQDQAPD
ISPTLKPSVEFENSFGNLSFGSLLDGKPSAPSSKTKLPKFTILQTSEVSLPSDPSCVEEI
LREMTHPWPTPLTAMHTSGNSEQSTFSIPGQESQHLTPGFALQKWSDPTSRASTKMLEDD
LKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKSKNNPVTPLLATPQPTPAAPASGGSGS
SSDSESSSESDSDTESSTTDSEANEAPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFIC
GQNETPMETISVPPPIIQPMEVQVKVKPNPSQVLAEPKERPLLSLIREKARPRPTPKIPE
TKALKHKLSTTLETASQRTIGKKQPKRVEKNPSIEEFTWPKPNISSSTPKEKESMELPEP
PRGRNKAAAHKPVPRKEPRPSIPLAAEKKKYRGPGKIVPKSREFIETDSSTSDSNTDQEE
TLQIKVLPPCMAPGGNTAKSKDTCGPSLTLSTFSSSNPPVPSDEPTFSPIPVMQTEPLSP
LRDHENLKNLWVKIDLDLLSRVPGHNSLQAAPAKPDHKETASKPRRQAAAATAADKAAPK
GKRKHKPTEVAEKIPEKKQRQEEAATICLLPPCISPAPPQKPPSTKENNSSRRANRRKEE
KLFPPPLSPLPEDPPRRRNISGNSGPFSQDKTIPMIGQITSTKPKRSEGKFCATFKGIPV
NEGDTPKKAASATVTVTNTAIATATVTATATVTATVTATATATATTTTTTTTISTITSTI
TTGLMDSNHLEMTSWAALPVLSSSTTNVRRPKLTFDDSVHNADYYMQEAKKLKHKADALF
EKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASPLASD
GEKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWVGNGKNT
PSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKLTREN
KEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggacttggagcagcagtgtcactatgaacaa
gaccgtagtgcacttaagaaaagggaatgggagcggagaaaccaagaagtccagcaagaa
gacgatctcttttcttcaggctttgatctttttggggagccctacaaggtagctgaatat
acaaacaaaggtgatgcacttgccaaccgagtccagaacacgctgggaaactatgatgaa
atgaaggatttgttaactaaccattctaatcagaatcatctagtgggaatcccaaagaat
tccgtgccccagactcccatcaacaaaaacgaaccaagcttttttccagaacaaaagaac
cgaatgatcccacctcatcaggatagcactcactcctcggcaccgatgcctccaccttcg
gttgtgatactgaattcaactctcatacacagcaaccggaagtcaaaacctgactggcca
cgagacagtcagaacactagcatggtaccggccagccaggctggcagtcagcccaacaaa
acgcagcccccaacacaggaccagccccctgccagactggaagacttctttgtctaccca
gctgaacagcctcaagttggagcagctgaagagtcaaacccatctgcaaaggaagacggt
aacctcaagtccggtggaggggatacgttcaaagaaatctttcagtccagctcaccagaa
gaatctgaattcacactgcaggcgcctgggtctcccctagttgcctcttctttattagct
cccagcagtggccttgtggttcaaaacttcccaccaggggtttactgcaaaacgagcgtg
ggacagcaaaaaccaaccgcatatgtcagacccatggatggccaggaccaagccccggac
atctctcccacgctgaagccttcagttgaattcgagaacagctttgggaatctgtcattt
gggtcactcttggatggcaaacccagtgcacccagttcaaagactaaactgccaaagttc
accattctccaaacaagtgaagtgagccttcccagtgacccaagctgtgttgaagaaatc
ttgcgggagatgacccatccctggcctactcctctcactgccatgcatacttctggaaac
tctgagcagagcacattttccatcccaggacaggaatcccagcatctgaccccaggattc
gccttacaaaagtggagcgacccgaccagcagagcttctacaaagatgcttgaagacgac
cttaagctgagcagcgatgaagatgaccttgaacccgtgaagaccttgaccactcagtgc
actgccactgagctctaccaggctgttgaaaaggcaaaatctaagaataatcctgtgacc
ccgctcttggccacgcctcagcccacacctgcagcgccagccagcgggggatccggcagc
tccagtgactctgagagcagctcagagtcagactcagacactgaaagcagcaccactgac
agtgaagccaatgaggcgccgcgcgtggccacgccagagcctgagccgccctccaccaac
aagtggcagctggacaaatggcttaacaaagtgacatctcagaacaagtcgtttatttgc
ggccaaaatgaaacacccatggagacgatctctgtacctcctccaatcatacagccaatg
gaagtccaggtcaaggtgaagccaaaccccagccaggtcctggctgaacccaaagagagg
cctctcctcagtcttatcagggagaaagcccgtccacggcccacccccaaaatcccagaa
acaaaggctctgaagcataaattgtcgacaactctcgagacagcatctcaaaggacaatt
ggcaaaaaacagcccaagagggtggagaagaaccccagcattgaggaatttacctggccc
aaaccaaatatctccagcagcactcccaaagaaaaggaaagcatggagcttcctgagccc
ccgagaggccgcaacaaagccgccgcccacaagccggtccctaggaaggaaccgaggccc
agcatccccttggccgccgagaagaagaagtaccgagggcccggcaagatcgtgccgaag
tcccgggagttcattgaaaccgactcgtctacgtctgattccaacacagatcaggaagag
accctgcagatcaaagtcctgcctccttgcatggctcctgggggcaacactgccaagtcc
aaggacacctgcgggcccagcctgaccctcagcaccttcagcagcagcaacccgcccgtc
cccagtgacgagcctactttttcacccatccctgtcatgcagaccgagcctctgtctcct
ctccgagatcacgagaatctgaaaaatctctgggtgaagattgacctcgacctactgtct
cgagtgcccggccacaactcactgcaggcggcgccggccaagccggaccacaaggagaca
gcctcaaagcccaggcggcaggcagctgccgccactgctgcggataaagcggcccccaag
ggcaagcgtaagcacaagccaacagaagttgcggagaaaatccctgagaagaagcagcgc
caggaggaggcggccaccatctgcctgctaccaccttgcatctcaccagctcccccccag
aaacctcccagcactaaggaaaataattcatccaggagagcaaacagaagaaaagaagaa
aagctgtttccccctccactttccccactgccagaggatcctccgcgccgcaggaatatc
agcggcaatagcggtcccttcagtcaagacaagaccatccctatgattggacagatcacc
tcgaccaaacctaagaggagtgaaggcaaattctgtgctactttcaaagggatacctgta
aatgagggagacactccaaaaaaggcagcctctgccaccgtcactgtcaccaacactgct
attgccactgccactgtcactgctactgccactgtcaccgccactgtcacagccactgcc
acggccactgccactaccaccaccactaccactaccatttccaccatcacctccaccatc
actactggcctcatggacagcaatcacctggagatgacatcctgggccgccctgcccgtt
ctttccagcagcactaccaatgtccggagacccaagctcacttttgatgactcggttcac
aacgctgattattacatgcaagaggcgaagaagctgaaacacaaagctgatgccctgttt
gagaaatttggcaaagccgtgaattatgccgatgcagccctgtccttcaccgaatgtggc
aacgcgatggagcgcgaccctctggaagccaagtctccgtacaccatgtactctgagacc
gtggagcttctcaggtatgcaatgaggttgaagaactttgcaagccccctggcttcggac
ggggagaaaaagctggccgtactatgctaccgatgcttatcacttctctacctgcggatg
ttcaaactgaagaaggaccacgccatgaagtactccagatcactgatggaatattttaag
caaaatgcttcaaaagtcgctcagataccatctccatgggtaggcaatggaaaaaacact
ccatccccagtgtctctcaacaacgtgtctcccatcaacgcaatggggaactgtaacaac
ggcccggtcaccatcccccagcgcattcaccacatggccgccagccatgtcaacatcact
agcaacgtgttacggggctacgaacactgggacatggccgacaaactgacaagagagaat
aaagaattctttggcgatctggacacgttgatggggcccctgacccagcacagcagcatg
accaatctcgtccgctacgttcgccagggactgtgctggctgcgcatcgacgcccacttg
ttgtag
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