Globicephala melas (long-finned pilot whale): 115849827
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Entry
115849827 CDS
T11080
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115849827 (APEX2)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115849827 (APEX2)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115849827 (APEX2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
115849827
NCBI-ProteinID:
XP_030707305
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Position
X:80263925..80298738
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AA seq
515 aa
AA seq
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MLRVVSWNINGIRSPVQGVGNEEPSNCTAMAMGRILDKLDADIVCLQETKVTRDVLTEPL
AIIEGCNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATQNGDVGCYGNMDDFT
QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFQEDPGRKWMDHLLSNLGCQAGSHT
GPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVMDTFQASFLLPEVM
GSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVRLEQDPVFRQSALQLS
NQTPVQMRQNKARVRSTRSRPSQAGSSRGQKNLMSYFQPSSSRPQASSNLELPSLGTLMT
PKTSEEDVMANVVEGRAKASEAKDEKEVRTSFWKSLLGGPLPMPLCGGHGEPCVMRTVKK
PGPNLGRHFYMCARPQGPPTDPSSRCSFFLWSRPS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtggtgagctggaacatcaatgggattcgcagccccgtgcaaggggtggga
aacgaggagcccagcaattgtaccgccatggccatggggcgcattttggacaagctggat
gctgacatcgtctgtcttcaggagaccaaagtaaccagggatgtgctgacagagcccctg
gctatcattgagggctgtaactcctatttcagcttcagccgcaaccgtagtggctattct
ggtgtagccaccttctgtaaggacagtgctaccccagtggctgctgaagaaggcctgagt
ggcctacttgccactcagaatggggacgtgggttgctacggaaacatggatgacttcact
caagaggagcttcgagctctggatagtgagggccgggccctcctcacacaacacaagatc
tgcacatgggaagggaaggagaagaccttgaccctaatcaacgtgtactgcccccatgcg
gaccctgggaagcctgagcggctcgcctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagccctcctggcagctggcagccatgttatcattctgggggacctgaataca
gctcaccgccccattgaccactgggatgcagtcaacctggaatgctttcaagaggaccca
ggtcgcaagtggatggaccacttgctcagtaacctggggtgccaggctggttcccatacg
ggacccttcattgatagctaccgatgcttccatccaaagcagaagggggccttcacctgc
tggtccacagtcagtggcgcccgccatctgaactatggctctcggcttgactatgtgctg
ggagacaggaccctggtcatggacacctttcaggcctccttcttgctgcctgaggtgatg
ggctctgaccactgccccgtgggtgcagtcttaagcgtgtcttctgtgccagcaaaacag
tgcccacctctgtgcacccgcttcctccctgagtttgcaggcacccagctcaagatcctt
agattcctagttcgtctcgaacaagatcctgtgttcaggcagtcagcgctgcagctcagc
aatcaaacaccggtacagatgcgccaaaacaaagcccgtgtgcgctcgaccaggtctcgg
ccaagtcaagctggttccagtagaggccaaaaaaacctgatgagctacttccagccatcc
tccagtcgtccccaagcttcttctaacttggagcttcctagcctgggcaccctcatgacc
ccaaagacctcagaagaggatgtgatggccaatgtggtggaggggcgggccaaggcttca
gaggccaaggatgaaaaggaggtacggacctcattctggaagtctctgctgggggggccc
ttgcccatgcctctgtgtgggggccatggggagccgtgtgtaatgcgaactgtgaagaag
ccaggacccaacctgggccgccacttctacatgtgtgccaggccccagggtcctcccact
gacccttcctcccgctgcagcttcttcctctggagcaggcccagctga
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