Globicephala melas (long-finned pilot whale): 115850005
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Entry
115850005 CDS
T11080
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115850005 (ZC3H12B)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115850005 (ZC3H12B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
115850005
NCBI-ProteinID:
XP_060148869
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All DBs
Position
X:72099698..72266896
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AA seq
835 aa
AA seq
DB search
MTATAAVETPKMKKNASKEEKQQPKQENTEQHNADSEELNSESDPEQMSLKSSSNDNSCQ
PGDVQLKKKDIPSKPHRQLCRSPCLDHPSFSQSSILQDGKLDLEKEYQTKMDFALKLGYA
EEQIQLVLNKLGPESLINDVLAELVRLGNKGDLEGQVNLSLLVPRGPSSREVASPELSLE
DEIDNSDNLRPVVIDGSNVAMSHGNKEEFSCRGIQLAVEWFLDKGHKDITVFVPAWRKEQ
SRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNY
RDLQIEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPC
PYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKTMSEGTLAKCGTGLSSTKG
DITSEVKRVAPKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPAKSHA
VGALNTRSASSPVPGSSHFSHQKSSLEHMTSMQYPPILVTNSHGTPISYSEQYPKFESLG
DHGYYSMLGDFSKLNINSMHNREYYMAETDRGLYARNPNLCPDNRMSHSRNDSYSSYNNL
YLAVADTHPEGSLKLHRSASQNHLQPFPHGYHEALTRVQSYGPEDSKQAPNKQSVPHLVL
HAQHPTTGAHSSCPGDYPMPPNIHPGATPQPGRALVMTRMDSISDSRLYESNPMRQRRPP
LCREQHASWDPLPCATDSYGYHSYPLSNSLMQPCYEPVMVRSVPEKMEQLWMNPWVGMCN
DSREHMIPEHQYQTYKNLCNIFPSNIVLAVMEKNPHTADAQQLAALIVSKLRAAR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacagctgcagtggaaacaccaaaaatgaagaagaatgcctccaaggaagag
aagcagcagcctaagcaagagaacacagagcagcataatgctgattctgaagagttgaac
tctgagagtgaccctgaacagatgagccttaaaagcagcagtaatgacaacagctgccaa
cctggagatgttcagttgaagaaaaaggatattccctctaagccacaccgccagctttgt
agatcaccctgcctagatcatccaagcttctcccagagtagcattctacaggatgggaag
cttgacttggaaaaagaataccaaaccaagatggattttgctttaaagctgggctatgca
gaggaacagattcaattagtactgaataagctgggtccagaatcgcttattaatgatgta
ctggcagaacttgtcagacttggaaacaaaggtgatttggaagggcaagtcaacttgagt
ttgttagtgcctcggggtcccagctccagagaagttgcaagccctgaactgtctcttgaa
gatgaaatagacaacagtgacaatttgagaccagttgtcatagatggaagtaatgtggca
atgagccatgggaataaagaagagttctcctgcagaggaatacaacttgctgtggaatgg
tttctagataaaggccataaagacattactgtatttgtgcctgcgtggagaaaggagcaa
tcccgccctgatgcaccaattacagatcaagatatcctacgtaaactggagaaggaaaag
attcttgtcttcacaccatccagaagggtccagggcaggagagttgtttgctatgatgac
cggttcatagtcaaactggcttttgattctgatggcatcattgtatccaatgataactac
cgagaccttcaaattgaaaagccagaatggaagaagtttatagaggagcggttgctgatg
tattcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgccatggccca
agccttgaaaacttcttaagaaagagacccgttgtccctgaacacaagaagcaaccatgc
ccttatggcaaaaaatgcacctacggccacaagtgcaaatactaccatccggagcgggcc
aaccaaccgcagcgttcggtggctgatgagctccgcatcagtgccaaactgtccacagtg
aaaaccatgagtgaaggcaccctggccaagtgtggcacagggctgtctagtaccaaaggt
gacataacctcagaagtcaaacgtgtggcccccaagcgccaatcggatcccagcatccgt
tccgtggctgtggagcctgaggaatggctgtccattgcccgtaagcctgaggccagctct
gtcccctcacttgtgactgctctaagtgtccccacaatcccacccgccaaaagccatgca
gtgggtgcactcaacacccgttcagccagcagcccagtgccaggatcctctcatttctcc
caccagaagtcctcactggagcacatgaccagcatgcagtaccccccgatcctggttacc
aatagccatgggacccctattagctactctgagcaatacccaaagtttgagtccttgggg
gaccacggctactattcaatgttaggtgacttctccaaattgaacatcaacagcatgcat
aatagagagtactacatggctgaaacagaccgggggttgtacgcccggaatcccaacctc
tgtcctgacaatcgtatgagccatagcaggaacgacagctattcctcttacaacaacctg
tatttggctgtagctgatactcatcctgaaggtagtttgaagctgcatcgctcagcatct
cagaaccatcttcagccttttcctcatggttaccatgaagccttaacgcgagtgcagagc
tatggcccagaggactctaagcaagcccccaacaaacaatcagtcccccacttagttcta
catgcccagcacccgacaactggagcacactccagctgtcctggggactatcccatgcct
cccaatatccatcctggggcaactccccagccaggacgtgccctggtgatgactcggatg
gacagcatttctgattcccgtctgtatgagagcaaccccatgaggcaaagacgccctcct
ctgtgccgggaacaacatgccagctgggacccactgccctgtgcaactgactcctatggc
taccactcctatcccttgagtaacagcctcatgcaaccatgctatgagccagtcatggta
cggagcgtgcctgaaaagatggagcagctttggatgaatccttgggttggaatgtgcaat
gattccagggagcatatgatcccagagcaccagtatcagacctacaagaacctctgcaat
attttcccttcaaacatcgtccttgcagtgatggagaagaatccccacacagcagatgcc
cagcaactagcagccttgattgtttctaagcttagggctgcacgttga
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