Globicephala melas (long-finned pilot whale): 115850186
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Entry
115850186 CDS
T11080
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115850186
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115850186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115850186
03041 Spliceosome [BR:
gmf03041
]
115850186
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115850186
mRNA cycle factors
Common to processing body (P body) and stress granule
115850186
Spliceosome [BR:
gmf03041
]
Common components
Common spliceosomal components
hnRNP proteins
115850186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_PARP14_3
RRM_7
RRM_fung
Motif
Other DBs
NCBI-GeneID:
115850186
NCBI-ProteinID:
XP_030707784
LinkDB
All DBs
Position
1:complement(49802439..49803739)
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AA seq
356 aa
AA seq
DB search
MASRKAISSVATKNNQEIRSVDLLSARGRHRVSIVDVSPASTAVVSKSESPKEPEQLRKL
CVGGLSFETTDDSLKSHCEQRGALTDCVVTRDPSTGRSRGFGVVTYATVEEVDAAMKARP
HEVDGRVGEPKRAVSREDSQRPGAHLTVKKTFVGGIKGDTEEHHLRDYFEQYGKTEVIEI
TTDRGSGIAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSQQETASASSSQRSPSGSG
NFGGGRGGGFGGNDSFDHGGNFSGRAGFGGSRSGGGYGGSGDGYNGFSNNGSNFGGGGSY
NDFGSYSNQSSNFGGNFGGRSSGPCGGGGQYFAKPPNQGGCGGSSSSSSCGSGRRF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagaaaagcaatttcctctgtggccactaagaataatcaggagatacgttcg
gtagatctcctttctgcccgtggacgccaccgagtaagcatcgtcgacgtctcccccgcc
tccactgccgtcgtgtctaagtcagagtcacccaaagagcccgaacagctgcggaagctc
tgcgtcggaggtttgagctttgaaacaaccgatgacagtctgaagagccattgtgagcag
cggggagcgctcacagattgtgtggtaacgagggatccaagcaccgggcgctccagaggc
ttcggggtcgtcacgtatgccactgtggaggaggtggatgcggccatgaaggcaaggcca
cacgaggtggatggaagagttggggaaccaaagagggccgtctcaagagaagattctcaa
agacctggtgcccacttaactgtgaaaaagacttttgttggtggcattaaaggagacact
gaagaacatcacctaagagattattttgaacagtatgggaaaactgaagtgattgaaatc
acgactgatcgaggcagtggcattgcgttcgtaacctttgatgaccatgactctgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctcagcaagagacggctagtgcctcatccagccaaagaagtccaagtggttctgga
aactttggtggtggtcgtggagggggttttggtgggaatgacagctttgatcatggagga
aacttcagtggtcgagctggctttggtggcagccgcagtggtggtggatatggtggcagt
ggggatggctataatggatttagtaacaatggaagcaattttggaggtggtggaagctac
aatgattttggcagttacagcaatcaatcttcaaattttggaggaaactttggaggcaga
agttctggcccctgtggtggtggaggccaatactttgccaaacccccaaaccaaggtggc
tgtggtggttccagcagcagcagtagctgtggcagtggcagaaggttttga
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