Globicephala melas (long-finned pilot whale): 115850578
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Entry
115850578 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115850578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmf04040
]
115850578
Ion channels [BR:
gmf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
115850578
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115850578
NCBI-ProteinID:
XP_060146727
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Position
20:complement(890864..898802)
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AA seq
545 aa
AA seq
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MIPGALLLLLLLLLLLLLLLLLLGALGAPFAPGARGSEAEGRLHEKLCSGYDSSVRPSWE
VRDCVGVSIGLSLAQLISLYEKDEEMSTKVCLDLEWTDYRLSWDPEEQEGIDSLRITAES
VWLPDVVLLNNNDGNFDVALDISVMVSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTM
VFSSYSYDSSEVSLQTGLGPDGQERQEVHIHEGNFIENGQWEIIHKPSRLIQPPVDHRGG
GERRREEVTLYLIICRKPLFYLVTVIAPCILITLLAIFVFYLPPDAGEKMGLSTFALLTL
PVFLLLPADKVPETSPSVPMIIKYLMFTMVLVTFSVILSIVDLNLHHRSPHTHQMPLXVR
QVSLLPPTNFNLPFHRPEGELQLLVECQTDLIHKLPPYLGLKRPKPERDQKPEPPPIPLR
DSPGSGWGRGTDEYFIRKPPNDFLFPKPNRFQPELSAPALRRFTDGPHRAVGLPPELREV
VSSISYIAQQLQEQEDHDALKEDWQFVVMVVDCLFLWTFIIFTSVGTLVIFQDATYHLAP
PDPFP
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaggggcactgctactgctgctgctgctgctgctgctgctgctgctgctgctg
ctgctgctgggggcgttgggggcgccgttcgccccgggcgcccgcggctcagaggcggag
ggccgactccacgagaaactttgctcgggctatgatagctcggtgaggccgtcgtgggag
gtgcgagactgcgtcggggtcagcattggtctcagcctagcgcaattaatcagcctgtac
gagaaggatgaggagatgagcacaaaggtctgcttagacctggagtggactgactacagg
ctgagctgggaccctgaggagcaagagggcatcgattcactccgcatcactgccgaatcc
gtgtggctaccagacgtggtgctcctaaacaacaacgacggaaattttgatgttgctctg
gacatcagcgtcatggtgtcgtccgacggctccgtgcgctggcagcccccgggcatctat
cgcagcagctgcagcatccaggtcacctacttcccctttgactggcagaactgcaccatg
gtgttcagttcctatagctatgacagctcagaagtcagtctgcagaccggcttgggtccc
gatgggcaggagcggcaggaagtgcatattcatgaaggcaactttattgagaatggtcaa
tgggagattattcacaagccttctcggctaatccagcctccagtggatcataggggaggg
ggggaaaggcggcgtgaagaagtcaccttgtacctcatcatttgccggaagcctctcttt
tacctggtcaccgtcattgccccatgcatcctcatcactcttctggccatcttcgtcttc
tacctgccaccagatgcaggagagaagatggggctctcgacctttgccctgctgaccctt
cctgtgttcctgctgctgccggcagacaaagtgcctgagacctccccgtctgtccccatg
attatcaaatacctcatgtttaccatggtcctcgtcaccttctcagtcatccttagcatc
gtagacctcaacctgcaccatcgctcaccccacacccaccaaatgcccctttaggtccgt
caggtatcgctcctccctcccaccaacttcaaccttccctttcacagacctgagggagaa
ctacaactcctggtagagtgtcaaacagatcttatccacaaactccctccgtatctgggt
ctgaagagacccaaacctgagagagaccagaaaccggagccacctcctatacctctcagg
gattctccaggaagtggctggggtcggggaacagatgaatatttcatccgcaagccacca
aatgattttctcttccccaaacccaacaggttccagcctgaactgtctgccccggccctg
cggcgatttaccgatggtccacaccgggctgtgggcctgcctcccgagctacgggaggtc
gtttcctcaatcagctacatcgctcaacagctgcaggaacaggaggaccacgacgcgctg
aaggaggactggcagtttgtggtcatggtggtggactgcctcttcctgtggaccttcatc
atcttcacgagcgtcgggaccctcgtcatctttcaggacgccacgtaccacttggcccct
cccgacccctttccttga
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