Globicephala melas (long-finned pilot whale): 115850597
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Entry
115850597 CDS
T11080
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115850597
Cell adhesion molecules [BR:
gmf04515
]
Cadherins
Protocadherins
115850597
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NCBI-GeneID:
115850597
NCBI-ProteinID:
XP_030708156
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Position
3:117587877..117592083
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AA seq
796 aa
AA seq
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MEPGERSPQQIRQALLFFVFLGGSLVCSETWRYSVAEEMEVGSFIGNVVKDIGLGVEDLA
ARGARVIFDDYKPYMQLDRQTGNLILNEKLDREALCDLTEPCILNFQILLENPLQFFRAE
LRVKDINDHTPTFLDKHILLKILESTTPGTSFQMDSAQDLDVGKNAVQNYTLSPNPHFHL
KLQDSEEGRKYAELLLDQPLDREKEPELRLTLTALDGGSPPRSATALVRVLVSDINDNAP
EFERSVYEVLVPENSPLDSLVVKVSATDLDAGLNGELSYSFSHVSRDIRKTFEIHPISGE
VRLKALLDFELIKSYTINIQAIDGGSLSGKSAILVSVVDVNDNPPEIVITSLTSPIPENS
SPDMVVAVFSLRDQDSGDNGRMVCSIQDNLPFLLKPTFKNFYTLLTESPLDREKRAEYNI
AITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPGLHIGSVRATDRD
AGANAQVTYSLLPPLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSP
ALSSQALVRVLVADDNDNAPFVLYPLQNASAPFTELVPRAAEAGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLH
VLLVDGFSQPYLPAPEAEAADAASAAPLTVYLVVALASVSSLFVFSVLVFVSVRLCRRGG
GASVGRCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLKGGSGTSEFNFLKSVASNHQESV
NDVEENSNFINRFGFN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagaaagaagccctcagcagataaggcaagcgctgcttttctttgttttc
ctgggagggtctttggtgtgttcagagacctggcgctattctgtggcagaggaaatggag
gtcggctcttttataggcaacgtggtgaaagacataggtttgggcgtggaagacctggct
gcgcggggggccagagtcatctttgatgactataaaccatacatgcaattggatcggcag
actggcaacttgatcttaaatgagaaactggaccgggaggcgctttgcgatctcaccgag
ccatgcatattaaatttccagatattattagaaaatcctttgcaattttttcgagctgag
cttagggtcaaagacataaatgatcacactcccacgtttctagacaaacatatacttctg
aaaatcttagaaagtactactccaggaacctcattccaaatggatagcgctcaggacttg
gatgtaggaaagaatgctgttcaaaactacacattaagccccaatcctcatttccacctt
aaactgcaagacagtgaggagggtagaaaatacgcagagctgttgctggaccaacctctg
gatcgagaaaaggagcctgaacttagattaacactaacagccctggatggtgggtctccg
cccaggtctgcaactgcactggtgcgtgtgttggtctcagatatcaatgacaatgcccca
gagtttgagaggtctgtctatgaggttttggtaccagaaaacagccctctggactccttg
gtcgtcaaggtgtctgctacagatttagatgcaggactaaatggagaactatcttattca
ttttcccacgtctccagagacatacggaaaacatttgaaatccatcccatttctggcgaa
gtccgtttaaaagcacttctggatttcgagttaattaagtcttatacaataaatattcag
gccattgacggtgggagcctttcaggaaaatcagcaattttagttagtgttgtagatgtg
aatgacaacccaccagaaatagtcataacatctcttaccagccccataccggaaaattcg
tcacctgacatggtagtcgctgtttttagcctacgagaccaagactctggggacaacggg
aggatggtttgctcaattcaggacaatctcccctttctcttgaagcctaccttcaaaaat
ttctacaccctgctaacagagagccctctagacagagagaaaagagccgagtacaacatc
gccatcaccgtcactgacatgggaacccccaggctgaaaaccgagcacaacataaccgtg
ctggtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtcc
gtccgcgagaacaacagtcccggcctgcacatcggcagcgtccgcgccacagacagagac
gcgggcgccaacgcccaggtcacctactcgctgctgccgcccctcgacgcgcacgtgccc
ctggcctccctggtgtccatcaacccagacaacggccacctgttcgccctgaggtccctg
gactacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggttcgccc
gcgctcagcagccaggcgctggtgcgcgtgctcgtggcggacgacaacgacaacgcgccc
ttcgtgctgtacccgctgcagaacgcctcggcgcccttcaccgagctggtgcccagggcg
gccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcg
cacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacagg
ctgctggtgctggtcaaggataacggcgagccgccgctctcggccagcgtcacgctgcac
gtgctgctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcg
gacgcggcctcggccgcccctctcaccgtctacctggtggtggccttggcgtcggtgtcg
tcgctcttcgtcttctcggtgctggtgttcgtctcggtgcggctgtgcaggaggggcggg
ggagcctcggtgggtcgctgctcggtgcccgagggccactttccgggccacctggtggac
gtcagcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgaaggggggc
tctgggaccagcgagttcaactttctgaagtctgttgcctccaatcaccaagagtctgta
aatgatgtagaggaaaactcaaactttataaatcgttttggattcaattag
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