Globicephala melas (long-finned pilot whale): 115850725
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Entry
115850725 CDS
T11080
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115850725
Cell adhesion molecules [BR:
gmf04515
]
Cadherins
Protocadherins
115850725
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NCBI-GeneID:
115850725
NCBI-ProteinID:
XP_030708259
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Position
3:117562883..117569860
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AA seq
799 aa
AA seq
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MEIGWMHNPRQRQVLVFFVLLSMYGASAELGPYSVVEETERGSFVANVGKDLGLGLTEMS
TRGARIISQWNKEHLQLKVQTGDLLINDKLDREKLCGPSEPCILHFQVLMEKPLEIFQAE
LRVKDINDHSPVFTEREMFLKIPENSPIGISFPLSNALDLDVGSNNVQNYKISPNSHFRV
LTQNRSDGRKYPELVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDTNDNAP
EFEQSLYKVHIPEDSPVGSLVVTVSASDVDSGVYGKISYAFFQPSEDISKTLEVNPMTGE
IRLRKKVDFETVLSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTTPIPENS
PDIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTQKTLDREERAEYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDA
GANAQVTYSLLPPLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVVDDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFVFSVLVFVAVRLCRRGGA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPILPNLPPQCP
GKETEENRTFYNSFGFNIQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggatgcacaatccgagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtatggggcgagcgcagagttggggccctattcagtagtggaagaaacagaa
agaggctcctttgtggcaaatgtaggaaaagacctggggctggggttgacagagatgtcc
acccgcggtgcccggatcatttcccagtggaacaaagagcatttgcagctcaaggttcag
actggggatttgctcataaatgacaaactagatcgagagaagctatgcggtccgagtgag
ccttgcatactacatttccaagtattaatggaaaaaccgttagagatatttcaggcagaa
ctgagagtgaaagacataaatgaccattcccccgtgttcactgaaagagaaatgtttcta
aaaataccggaaaacagtcctataggaatttcattccctctgagtaatgctctggacttg
gatgtaggcagcaacaatgttcagaactataaaatcagccccaactcccatttccgggtt
ctaacccaaaatcgcagcgatggcagaaaataccctgagctggtgttggacaaagagctg
gatcgggaggaggagcctgaaatctcattaaccctgacagcgctggatggcggctctccg
cctcggtatggaacagcccaggtgcgcattgaagtggtggacactaacgataacgcccct
gagtttgagcagtccctctacaaggtgcatattcccgaagacagccccgtaggctccctg
gttgtcactgtctctgccagcgatgtagacagtggagtctatgggaaaatatcatacgca
ttctttcagccttcagaagatattagtaaaactttggaggtaaatcctatgacaggtgaa
attcgactgagaaaaaaagttgattttgaaacagttctgtcttatgaagtagacatcaag
gccactgatgggggaggtctttcaggaaaatgcactcttctcctgcaagtagtggatgtg
aatgacaatcctccagaagtgacagtgtctgcactcaccactcccatcccagagaactcc
cctgacattgtagttgctgttttcagtgtttcagatcctgactctggggacaatgggaaa
actatttcctccatccaggatgaccttccttttcttctaaaaccgtcagtcaagaacttt
tacaccttagtaacccagaaaacactagatagagaagaaagagccgagtacaatatcacc
atcaccgtcacagatatgggaacccccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtc
cgcgagaacaacagtcccgccctgcacatcggcagcgtccgcgccacagacagagacgcg
ggcgccaacgcccaggtcacctattcgctgctgccgcccctcgacgcgcacgtgcccctg
gcctccctggtgtccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgccagcg
ctcagcagccaggcgctggtgcgcgtgcttgtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctg
ctggtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccagcccctgaagcggaagcggcggac
gcggccccggccgccccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcgtcttctcggtgctggtgttcgtcgcggtgcggctgtgcaggaggggcggggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggaggctct
gagagtaatgacttcaaattcttgaagccgattctccccaacctcccgccccaatgccct
gggaaggaaacagaagaaaatcgtaccttctacaacagctttgggttcaatattcagtga
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