Globicephala melas (long-finned pilot whale): 115851303
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Entry
115851303 CDS
T11080
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03082
ATP-dependent chromatin remodeling
gmf04714
Thermogenesis
gmf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115851303 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
115851303 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
115851303 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115851303 (ARID1B)
03021 Transcription machinery [BR:
gmf03021
]
115851303 (ARID1B)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115851303 (ARID1B)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
ARID
115851303 (ARID1B)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115851303 (ARID1B)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115851303 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115851303
NCBI-ProteinID:
XP_060139267
LinkDB
All DBs
Position
14:78325965..78736616
Genome browser
AA seq
2345 aa
AA seq
DB search
MPGGGGDGSGLNNVHHHPPHPRHELNMAHNASAAAGAASANSAKSGGSEAALKEGGSAAA
LSSSSSSSAAASSSSSSAGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHLHH
HAHHLHRHHHALQQQLSQFQQQQQQRQQHPISNNSLSGAGSGTAQPGPDMEQPQHGGAKD
SAGGSQAEPPGQPLLSKPGDEDDAPPKMGEPAGGRYEQPGLGALGAQQQPVAVPGGGGGV
GGGGVGGGVGGPAAVSEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAA
AGAPNSMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGSGGGGGGGGGGAGA
GAVAAAAAAAAAAAAAGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAA
GAAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPPSQPQ
SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ
GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPAGSYGPPGPQRYPIGIQGRTPGAMGGMQ
YPQQQVPPQYGQPGVSGYCQQGQQPYYSQQPQAQYLPSQPQQRYQPQQDMSQEGYGTRSQ
PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN
PAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE
SSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQS
NSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANSQMHGQGPSQPCGAM
PLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAA
NSAQSRPPHIRSPAYPSQPGAGGRPMFSSQHPSYGNSQAPMLNQPDQYGQGGFPGVNQSG
LMASSSPYSQPMSNSSGLMNTQAPPYSMTPNMVNSSTDMMSPGESKLPLPLKADGKEEGT
AQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSS
PKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLY
VCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKTERGEEPPP
EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQIT
PMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSAPYQQGMSMPEVMGRMPYEPNKDPFGG
MRKVPGSSEPFMTQGQMAASSMQDMYNQSPSGAMSSLGMGQRQPFPYGASYDRRHEPYGQ
QYPGQGPPSGQPAYGGHQPGLYPQQTNYKRHMDGVYGPPAKRHEGDMYNMQYGNQQQEMY
NQYGSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQAHGIPPQMMGGPMQSSSSEGPQQSM
WATRNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMS
SSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQKVM
PTVPTAQVTGPAPQPPPVRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVG
DPSQKALDHNVVKRDDSQSLADDSGKEEEDAECIDEEEDEEEDEEEDGGKAETEDRSSMA
LASPDATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGG
DTTEHIQTHFESKMEIPPRRRPPPPLSATGRKKEQEGKGDPEEQQEKSIIATIDDVLSAR
PGALPEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDEAPLCTVAHWQDSLAKR
CICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKG
VACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQ
DPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKN
PVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP
PPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLF
QIGQL
NT seq
7038 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggcggcggcgacggcagcggcctgaataacgtgcaccaccaccccccgcac
ccccgtcacgaactgaacatggcccataacgcgagcgcggcggccggcgccgccagcgct
aacagcgccaagagcggcggctccgaggcggctctcaaggagggtggaagcgccgccgcg
ctgtcctcctcctcctcctcctccgcggcggcgtcctcctcttcctcctcggcgggcccg
ggctcggccatggagacggggctgctccccaaccacaaactgaaaaccgttggcgaagcc
cccgccgcaccgccccaccagcagcaccaccaccaccaccatgcccaccacctgcaccac
catgcccaccacctccaccgccaccaccacgcactacaacagcagctaagccagttccag
cagcagcagcagcagcggcagcagcatcccatttccaacaacagtctcagcggcgcgggc
agtggcacggctcagcccggtcccgacatggagcaaccgcaacatggaggggccaaggac
agtgccgggggcagccaggccgagcccccgggccagcctctgctgagcaagccgggcgac
gaggacgacgcgccgcccaagatgggggagccggcgggcggccgctacgagcagccgggc
ctgggcgccctgggcgcgcagcagcagccggtcgccgtgcccgggggcggcggcggcgtc
ggcggcggcggcgtcggcggcggcgtcggcggcccggcggccgtctcggagtttaataat
tactatggcagcgctgccccagctagcggcggccccggcggccgcgctgggccttgcttt
gatcaacatggcggacaacaaagccccgggatggggatgatgcactccgcctcagctgcc
gccggagcccccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagc
cagtacaaccattatccgggctacagccggcccagcgcgggcggcggcggcggcggcggc
ggaggaggaggaggaggcagcggaggaggaggaggaggaggaggaggaggagcaggagcg
ggagctgtggcggcggcggccgcggcggcggcggcggcagcagcagcaggaggcggcggc
ggcggctatgggggctcgtcctcggggtacggggtgctgagctccccccggcagcagggc
ggcggcatgatgatgggccccgggggcggcggggccgcaagcctcagcaaggcggccgcc
ggcgcggcggcggggggcttccagcgcttcgccgggcagaaccagcacccgtcgggggcc
actccgaccctcaaccagctgctcacctcgcccagccccatgatgaggagctacggcggc
agctacccggactacagcagccccagcgcgccgccgccgccgccgccgtcgcagccccag
tcccaggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggc
ttgggcaaggacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcgcaa
caaaggagccacccggcgatgagccccggcacccccggcccgaccatgggcagatcccag
ggcagcccaatggatcccatggtgatgaagagacctcagctgtatgggatgggcagtaac
cctcattctcagccacagcagagcagcccttacccggcaggttcctacggccccccaggc
ccacagcggtatccgattggcattcaaggtcggaccccaggggccatgggaggaatgcag
tacccacagcagcaggtgccgcctcagtatggccagccaggtgtgagcggttactgccag
cagggccagcagccttactacagccagcagccgcaggcgcagtatctgccgtcccagccc
cagcagaggtaccagccgcagcaggatatgtctcaggaaggctatggaactaggtctcaa
cctcctctggctcctggaaaacccaaccatgaagacttgaacttaatacaacaagaaaga
ccatcaagtttaccagacctgtctggctccattgatgacctccccacgggaacggaagca
actttgagctcagcagtcagtgcatccgggtccacaagcagccaaggggatcagagcaac
ccagctcagtcgcctttctctccacacgcatctccccatctctccagcatccctgggggc
ccatcgccttctcctgtcggctctcctgtaggaagcaaccagtcacgatctggcccaatt
tctcctgcaagtattccaggcagtcagatgcctcctcagccacctgggagccagtcagaa
tccagttctcatcctgccttgagccagtcaccaatgccacaggaaagaggttttatggca
ggcacacaaagaaaccctcagatgtctcaatatggacctcaacagacaggaccatccatg
tcgcctcatccttctcctggaggccagatgcatcctggaatcagtagctttcagcagagt
aactcaagtgggacttacggtccacagatgagccagtatggaccacaaggtaactactcc
agacccccaacatatagtggggtgcccagtgcaagctacagcggcccagggcccggcatg
ggcatcaatgccaacagccagatgcatggacaagggccaagccagccgtgtggtgctatg
cccctgggacgaatgccatcagctgggatgcagaacagaccctttcctggaaatatgagc
agcatgacccctagttctcctggcatgtctcagcagggagggccaggaatggggccacca
atgccaaccgtgaaccgtaaggcacaggaggcagctgccgcagtgatgcaggccgctgcg
aactcggcacaaagcaggccaccgcacattaggtcgcctgcgtaccccagccagcctggg
gctggcggacgccccatgttttcttcccagcaccccagctatggcaactctcaggctccc
atgctgaaccagcctgaccagtacgggcaaggcggctttcccggcgtgaatcagagcgga
ctcatggcttccagctctccctacagccagcccatgagcaacagctctgggctgatgaac
acccaggcgcccccctacagcatgacgcccaatatggtgaacagctcaacagatatgatg
tctcctggtgaatccaaactgcccctgcctctcaaagcagatggtaaagaagaaggcact
gcacagccggagagcaagtcgaaggatagctacagctctcagggtatttctcagccccca
acccccggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctca
tttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagc
cctaagtccagctcatccaccaccactggcgaaaagatcacaaaggtgtatgaattgggg
aatgagccagagagaaagctttgggtagaccgatacctcaccttcatggaggagagaggc
tccccggtctcaagtctgcctgcggtgggcaagaagcccttggacctgttccgactctat
gtctgcgttaaagagattggaggtttggcacaggttaataaaaacaagaagtggcgcgag
ctggcaaccaacctaaatgtcggcacttcaagcagtgcagcgagctccctgaaaaagcag
tatattcagtacctgtttgcctttgagtgcaagactgagcgaggggaggagcccccgccg
gaagtcttcagcacgggagacaccaagaagcagcccaagctccagccgccctctcctgct
aactcaggatccttgcaaggtccacagactccccagtcaactggcagtaattccatggca
gaggttccaggtgacctgaagccaccgactccggcctccacccctcacggacagattacc
ccaatgcaaggtggaagaagcagtacagtcagtgtgcacgacccattctcagacgcaagt
gattcatcattcccaaaacgcaactccatgactccgagcgccccgtaccagcagggcatg
agcatgccagaagtgatgggcaggatgccctacgagcccaacaaggacccctttggagga
atgagaaaagtgcctggaagtagcgagccgtttatgacgcaaggacagatggccgccagc
agcatgcaggacatgtacaaccagagtccgtctggagcgatgtccagtctaggcatgggg
cagcggcagccgtttccctatggagccagttacgatcgaaggcatgaaccttacgggcaa
cagtacccaggccaaggccctccctcaggacagccagcatatggaggacaccagccgggc
ctgtatccacagcagacgaattacaagcgccatatggatggcgtgtatgggcctccagcc
aaacgccacgagggagacatgtacaacatgcagtacggcaaccagcagcaagagatgtat
aaccagtacggaagttcctactccggacccgacaggaggcccatccagggacagtacccg
tacccctacaccagggagaggatgcaaggcccggggcagatacaggcacacgggatccca
ccccagatgatgggcggcccaatgcagtcgtcttccagcgaagggcctcagcagagtatg
tgggcgacacgcaacgatatgccttatccctaccagagcaggcaaggccccggcggccct
gcacagacacctccttacccaggcatgaaccgcacggacgacatgatggtacctgatcaa
aggataaaccacgagagccagtggccttctcacgtcagccagcgtcagccttacatgtcc
tcttcagcctccatgcagcccatcacgcgcccgcctcagtcatcctaccagacgccaccg
tcgctgccaaatcatatctccagggcgcccagccccgcctccttccagcgctccctggag
agccgcatgtctcccagcaagtcccccttcctcccctccatgaagatgcagaaggtcatg
cccaccgtccccacggcccaggtcacggggccggccccccagccgcccccagtcagaagg
gagattacctttcctcctggctctgtggaagcgtcacagcccgtcttgaaacagaggcgg
aagattacctcaaaagatattgttactcctgaggcctggcgtgtgatgatgtcccttaag
tcaggtcttctggctgaaagtacttgggctttggacactattaatattcttctatatgat
gacagcactgtcgctactttcaatctctcccagttgtccggatttctcgaacttttagta
gagtactttaggaaatgcctgattgacatttttgggattcttatggaatatgaagtggga
gaccccagccaaaaagcacttgatcacaatgtggtaaagagagatgacagccagtccttg
gccgacgattctgggaaagaggaagaagatgccgaatgtattgatgaggaggaagacgag
gaggaggacgaggaggaagacggtgggaaggcggagactgaggacaggagcagcatggcc
ttggcctcccccgatgccaccgcggatccaaaggagaagcccaggcaagccagtaagttc
gacaagctgccaataaagatagtcaaaaagaacaacctgtttgtcgtcgaccggtctgac
aagctgggccgtgttcaggagttcagcagtggacttctgcactggcagctcggtggcggg
gacaccaccgagcacatccagactcactttgagagcaagatggaaattcctcctcgcagg
cgtccacctccccctttaagcgccacaggtagaaagaaagagcaagaaggcaaaggggac
cctgaagagcagcaagagaagagcatcattgcaaccattgatgacgtcctgtctgctcgg
ccaggggctcttcctgaagacgcaaaccctggtacccaaaccgaaagcagtaagtttccc
tttggaatccatcaagccaaaagtcaccgcaatatcaagctgctggaggacgagccgcgg
agccgggacgaggctccgctctgcaccgtcgcgcactggcaggactcgctggctaagcgc
tgcatctgcgtgtcgaatattgtccggagcttgtcttttgtgcctgggaatgacgctgaa
atgtccaaacatccaggcttggtgctgatcctggggaagctgattcttcttcaccacgag
catcccgagagaaaacgagcgccgcagacctacgagaaggaggaagacgaggacaaaggg
gtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggataacacg
ttggtcaccttggccaacatttctgggcagctagacttgtctgcttacacggaaagcatc
tgcttgccaatattggatggcttgctgcactggatggtgtgcccgtcagcagaggcacaa
gacccctttcccactgtgggacccaactctgtcctgtcgcctcagagacttgtgctggag
acgctctgtaaactcagcatccaggacaacaatgtggacctgatcttggctacgcctcca
tttagtcgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaaaac
ccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggacgcgctg
gctgcaagggccatagctgtgcagaaaggaagcatcgggaacttgataagcttcctagag
gatggggtcacgatggcccagtatcagcagagccagcataacctcatgcacatgcagccc
ccgcctctagagccccctagcgtggacatgatgtgcagggcggccaaggctctgctggcc
atggccagagtggacgagaaccgctcagagttccttctgcacgagggtcgattgctggat
atctcgatatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgtactgttt
cagattgggcagttatga
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integrated database retrieval system
