Globicephala melas (long-finned pilot whale): 115851320
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Entry
115851320 CDS
T11080
Symbol
SYNE1
Name
(RefSeq) nesprin-1 isoform X1
Organism
gmf Globicephala melas (long-finned pilot whale)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
SYNE1
Spectrin_SYNE1
KASH
STIV_B116-like
RhiE-like_linker
Motif
Other DBs
NCBI-GeneID:
115851320
NCBI-ProteinID:
XP_060139237
LinkDB
All DBs
Position
14:complement(74772945..75230520)
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AA seq
2598 aa
AA seq
DB search
MAGSSSDRVDPTATEQPPAAKRIGTGISRAEEPPPVSSQSWRGNSNPTLSCRDFWWCWEL
GMEGQKSPAEDQMRMKWESLHQEFSTKQKLLQNVLQHEQEQVLYSRPNRLLSGMPLYKGD
GQAQDKSAVTSLLDGLNQAFEEVSAQGGGTKRQNTDLEQKLYDGVSATSTWLDDVEDRLF
AATALLPAEAETCLFNQETLAKDIKEMSEEMDKNKNLFSQAFPENGDNRDVIEDTLGCLL
GRLSLLDSVVNQRCHQMKERLQQILNFQNDLKVLFASLADHKYIILQKLANVFEQPVAEQ
IEAIQQAEDGLKELDAGITELKRRGDRLQIEQPWVQELSKLQDMYDELMMTTGSRRGGLN
QNLALKGQYERALQDLADLLETGREKMAGDQKIIVSSKEDIQQLLDKHKEYFQGLESHMI
LTETLFRKVISFAVLRETQFHTDLMEQASAVLKGAHKRGVELEYILETWSHLDENQRELS
RQLEVVETSIPTVGLVEESEDRLIDRITLYQHLKSSLNEYQPKLYQVLDDGKRLLISVSC
SDLESQLNQLGEHWLNDTNKVSKELHRLETILKHWTRYQSESADLIHWLQSAKDRLEFWT
QQSVTVPQELEMVRDHLNAFLEFSKEVDAKSTLKSSVLSTGNQLLRLKKVDIAALRSELS
HIDGQWTDLLTNIPTVQEKLHQLQMDKLPSRRAISEVMAWISLMENVIQMDEESIKNSIG
YKAIHEYLQKYKGFKIDINCKQLTVDFVNQSVLQISSQDVESKRSDKTDFAEQLGAMNKS
WQILQGLVTEKIQLLEGLLESWSEYENNVQCLKTWFETQEKRLKQQERIGDQASVQNALK
DCQDLEDLIKAKEKEVEKIEQNGLALIQNKKEEASGIVVSTLQDLSHTWANLDHRVGQLK
ILLKSVLDQWSHHKVAFDEINSYLMEARYSLSRFRLLTGSLEAVQVQVDNLQNLQDDLEK
QEKSLQKFGSITNQLLKESHPPVTETLTDTLKEVNMRWNHLLEEIAEQLHASKALLQLWQ
RYKDYSKQCAATVQQQEGRTNELLKAATDRDIADDEVATWIQDCNDLLKGLGTVKDSLFV
LHELGEQLKQQVDASAASAIQSDQLCLSQHLCALEQALCKQQTVLQAGVLDYETFTKSLE
ALEAWIVEAEEILQGQDPSHSSDLSTIQERMEELKGQMLKFSSMVPDLDRLNELGYRLPL
NDKEIKRMQNLNRHWSLISTQTTERFSKLQSFLLQHQTFLEKCETWMEFLVQTEQKLAVE
ISGNYQPLLEQQRAHELFQAEMFSRQQILHSIIVDGQHLLEQGQVDDRDEFNLKLTLLSN
QWQGVIRRAQQRRGIIDSQIRQWQRYQEMAEKLRKWLVEVSYLPVSGLGSVPIPLQQART
LFDEVQFKEKVFLRQQGSYILTVEAGKQLLLSADGAAEAALQAELAEIQERWRSASVHLE
EQKKKLAFLLQDWEKCENGIADSLEKLRTFKKRLSPPLPDHHDGLHAEQMRGKELENAVG
SWTDDLARLMVLKDAVCAYISADDISILNERMELLQRQWEELCHQLSLRQQQVSERLNEW
AVFSEKNKELCEWLTQMESKISQNGDILIEEMIEKLRKDYQEEIAIAQENKIQLQQMGER
LARASHESKASEIEYKLGKINDRWQHLLDLMAARVKKLKETLVAVQQLDKNMSSLRTWLA
HIESELAKPIVYDSCDSEEIQKKLNKQQELQRDIEKHSTGVASVLNLCEVLLHDCDACAT
DAECGSIQQATRNLDRRWRNICAVSMERRLKIEETWRLWQKFLDDFSRFEDWLKCSERVA
AFPSSSGVLYTVAKDELKKFEGFQRQVHETLTQLELINKQYRRLARENRTDSACSLKHMI
HEGNQRWDNLQKRVTSILRRLKHFIGQREEFETARDSILVWLTEMDLQLTNIEHFSECDV
QAKIKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPLDATFIEEELDELRRYCQEVFGR
VERYHKKLIRLPLPDDEHDLSDRELELEEAAALSDLHWRDTSADSALSPQPASNPSLSLA
QPLQGERSGRDTPASVDSIPLEWDHDYDLSRDLESAVSRTLPSEDEEGQEDKDFYLRGAV
GLSDVTIPESPEAYVKLTESAIRNPSGDPSTLESQIQQLGKALDDSHFQMQQMENIIHSK
TPAGPELDSSYRGYMKLLGECSGSIDSVKRLEHKLTEEEEHFPGFVNLNSTETQTAGVID
RWELLQAQALSKELRRKQNPQRWQQFHSDLSRVLTWLQETEEDLEQLQRRQRSTDIQPIA
LQIKKLKELQKAVDHHKAIILSINLCSSEFTQTGSEESQDLQGRLSQMNGRWDRVCSLLE
EWRGLLQDALMQCQDFHEMSHGLLLMLENIDRRKNEIVPVDSNLDAEILQDHLKQLTQIR
HELLESQLKVASLQDMSRQLLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSHHIKELEKL
LDMSSSQQDLSSWSSADELDTSGSVSPTSGRSSPNRQKTPRGKCSLSQPGPSVNSPHSRS
IKGGSDSSLSEPRPARSGRAFLFRVLRAALPLQLLLLFLIGLACLVPMSQEDYSCALSNN
FARSFHPMLRYTNGPPPL
NT seq
7797 nt
NT seq
+upstream
nt +downstream
nt
atggctggctcaagctcggaccgcgtggacccaacagcgacagagcagcctccagcagca
aaaagaattggaacaggaattagcagagcagaagagcctcctccagtcagtagccagtct
tggagaggaaattctaacccaacactcagctgcagagacttctggtggtgttgggagttg
gggatggaagggcagaaatcacctgctgaagaccagatgagaatgaaatgggaaagcctc
catcaggaatttagcaccaagcagaaactgcttcagaatgttctgcaacacgaacaagag
caagtgctttacagcaggccaaatcggctcctgtctggcatgccactgtacaaaggggac
ggacaggcccaggataaatccgcggtgacgtctttgctggatggattgaaccaggccttc
gaggaggtttcagcccagggtggagggacaaagaggcagaacactgacttggaacagaag
ctatacgacggggtctcggctacctctacgtggctggatgatgtagaggatcgcttattt
gctgccacagcgcttctaccagcagaggcggaaacttgcctctttaaccaagagactctt
gccaaagatattaaggaaatgtctgaagaaatggataagaacaagaacttgttttcccaa
gcctttccagagaatggtgataaccgagatgttatcgaagacactttgggttgtcttttg
ggcagattgtctttgctagactcagtagtaaatcaacgatgtcatcagatgaaggaaaga
cttcagcaaatactaaatttccagaatgatctgaaggtgctgtttgcatcactggctgac
cacaaatacatcattctgcagaaactggcaaatgtgtttgaacagcctgtggcagagcaa
atagaggcaatacagcaggctgaagatgggctaaaggaattggatgcgggaatcactgag
ttgaagaggcgtggtgacaggctgcagattgagcagccttgggtgcaagaactctccaaa
ctccaggacatgtacgatgagctgatgatgaccactggctcccggcggggcggtctgaac
cagaatcttgcactgaagggtcagtatgaaagggccctgcaagatctggctgacctgctg
gagaccggacgcgagaagatggcaggagaccagaaaattatcgtgtcttccaaagaagac
atccaacaactacttgacaaacataaggagtactttcagggcctggagtctcatatgatc
ttgactgaaacgctcttcaggaaggttatcagctttgcagtcctacgggaaactcagttc
cacacagacctgatggagcaggcttcggctgtgctcaaaggggctcacaagaggggtgtg
gagttggagtacattctcgagacatggtcccatctggatgagaaccagcgggagcttagc
aggcagctggaggtggtggagaccagcattccgactgtgggtttggtggaggagagcgaa
gacaggcttatcgaccggataacactctaccagcatttgaaatccagccttaatgaatac
cagcccaaattatatcaggtactagatgatgggaaacgacttctgatatctgttagctgc
tcagatctagaaagccagctaaatcaacttggagaacactggttaaatgacaccaacaaa
gtgtctaaggaacttcacagattggaaacaatattgaaacactggaccagatatcaaagt
gaatctgcagatctcatccactggttacagtctgcaaaagacaggctagaattttggact
caacaatctgtgacagttcctcaagaactggaaatggtccgtgatcatctgaacgctttt
ctggagttttccaaagaggtggatgccaaatctaccttgaaatcgtctgttctgagcact
ggaaatcagcttcttagactaaagaaagtggacatagctgccctgcgttctgagctgtca
cacattgatggccagtggactgacctgctgacaaatattccaaccgtacaggaaaagctc
caccagctgcaaatggataagctgccttctcgccgtgccatttctgaagtcatggcttgg
atttctctcatggaaaatgttattcaaatggatgaagagagtattaaaaactccatcggt
tacaaggcaattcatgaataccttcagaaatataagggttttaagatcgacattaactgt
aaacagctgactgtcgattttgtgaaccagtctgtgctacaaatcagtagtcaggacgtg
gaaagtaaacgcagcgataagactgattttgctgagcaacttggagcaatgaataaaagc
tggcaaatcctgcagggtctcgtcactgagaagatccagctgttggaaggcttattggaa
tcttggtcagaatatgaaaataacgtacaatgtctgaaaacttggtttgaaacccaggaa
aagagactaaagcaacaagagcgaattggagatcaggcttcagttcagaacgcgctgaaa
gactgtcaggatctggaagatttgattaaagcaaaagaaaaagaggtagagaaaattgag
cagaatggacttgctttgattcagaacaagaaagaagaagcctctggcattgtcgtgagc
acgcttcaggatctcagccacacctgggcaaatttagaccacagggttgggcagttaaag
atcctgctgaagtctgtgcttgaccagtggagccaccacaaagtggcctttgatgagata
aacagttacctcatggaggccagatactctctctcccgattccgtctgctgactggatct
ttagaagctgtgcaggttcaggtggacaatcttcagaatcttcaagatgatctagaaaaa
caggaaaagagcttacagaaatttggctctatcaccaaccaactgttaaaagagagtcac
ccgcctgtgacagaaactcttactgatacactaaaagaagtcaatatgagatggaatcac
ttgctggaagagattgcagagcagctgcacgccagcaaggccctacttcagctttggcag
agatacaaggactactccaaacagtgtgctgctacagttcaacagcaggagggtcgaacc
aatgagctcttgaaggcagccactgacagggacatcgcggacgacgaagttgccacatgg
attcaagattgcaacgacctgctcaaaggactggggacagttaaggattcccttttcgtt
ctccatgagctgggagagcaactcaagcaacaagtagatgcctcggcagcatcagccatt
caatctgatcaactctgtttgagtcaacacttatgtgccctagaacaggctctttgcaaa
cagcagactgtgttacaggctggagttcttgactatgaaacctttaccaagagtttagaa
gctttggaagcctggatagtagaagctgaagaaatactacaagggcaggaccctagccac
tcgtctgacctctcgaccatccaagaaaggatggaggaacttaagggacagatgctaaaa
ttcagcagcatggtcccagatttagaccggctaaatgagcttggatacaggttgccccta
aatgataaagaaatcaaaaggatgcagaatctgaaccggcactggtctctgatctccacc
cagactacagaaagattcagtaagttacagtcatttttgctacaacatcaaactttcttg
gaaaaatgtgaaacatggatggaattcctagttcaaacagaacagaagttagcagtagag
atttcaggcaattatcagcctcttttggagcagcagagagcacatgagttgtttcaagca
gagatgttcagtcgtcagcagattttacactcgatcattgttgatggacagcatcttcta
gaacaaggtcaagttgatgacagggatgagttcaacctcaagttgacccttctcagtaat
cagtggcagggcgtgatacgcagagcccagcagaggcggggcatcattgacagccagatc
cgccagtggcagcgctatcaggagatggcggaaaagcttcggaaatggttggttgaagtg
tcctatctccccgtgagtggtctcggaagtgtcccaataccactgcagcaagcaaggacc
ctctttgatgaagtgcagttcaaagaaaaagtgttcctgcgacagcaaggcagctacatt
ctcactgtggaggctggcaaacagctcctgctttctgccgacggtgcagctgaggctgcc
ttgcaggctgaactcgctgaaatccaagagagatggagatcagccagtgtgcatctggag
gagcagaagaaaaaactggccttcttgttgcaggactgggaaaaatgtgagaacggaata
gctgattctctggagaaactacgaaccttcaaaaagaggctctccccacctctgcccgat
caccacgacgggctccacgcggagcagatgcgtggcaaggaattggaaaatgcagttggg
agctggacagatgacctggcacggctgatggtgctgaaggatgctgtctgtgcctacatc
agtgcagacgatatctccatccttaacgaacgcatggagcttctgcaaaggcagtgggaa
gaactatgccaccagctctctttaaggcagcagcaagtaagtgagagactgaatgaatgg
gccgtcttcagtgaaaagaacaaggagctttgcgaatggttgactcagatggaaagcaaa
atttctcagaatggagacattctcattgaagaaatgattgagaagctcaggaaggattat
caagaggaaattgctattgcccaagagaacaaaatacagctccagcaaatgggagaacga
cttgcccgagccagccatgaaagcaaagcatctgagattgaatacaagctcgggaagatc
aatgaccgatggcagcacctcctggacctcatggcagccagggtaaagaagctgaaggag
accctggtcgctgtacagcagctggataaaaacatgagcagcctgagaacgtggctggcc
cacatagagtcagagctggccaagccgatcgtctacgattcctgtgactcagaagaaata
cagaaaaagcttaacaagcagcaggagcttcagagagacatagagaaacacagcacgggt
gtggcctctgtcctcaacctgtgcgaggttctcctgcatgactgtgatgcctgtgccaca
gatgccgagtgcgggtccatccagcaggctacgcgcaacctggaccggcgatggagaaat
atctgcgctgtgtccatggaaagaaggctaaaaattgaagagacgtggagattgtggcag
aagtttctggatgacttttctcgttttgaagattggctgaaatgctcggaaagggtagct
gccttccccagctcttctggggtgctctatacagttgccaaggacgaactaaagaaattt
gagggtttccagcgacaggtccatgagaccctgacccagctggaactgatcaacaagcag
taccgccgcctggccagagagaaccgcaccgactcggcatgcagcctgaaacacatgatc
cacgaaggcaaccagagatgggacaacctgcagaagcgcgtcacctccatcttgcgcaga
ctcaagcatttcattggccagcgggaggagtttgagactgcacgggacagcatcctggtg
tggctgacagagatggatttgcagctcactaacattgagcatttttccgagtgtgatgtt
caagctaaaataaagcaactcaaggccttccagcaggaaatctcattgaaccacaataag
attgagcagataattgcccaaggagaacagctgatagaaaagagtgaacccctggatgcc
acgttcattgaagaagagttggatgaactccgacgttactgtcaggaggtcttcgggcgc
gtggaaagataccataagaaactgattcgcctgcctctcccagatgacgagcacgacctc
tctgaccgggagctggagctggaggaggctgcagctctgtcggacctccactggcgcgac
acctccgcggacagcgcgctctccccccagcctgcctccaacccctccctctcactcgcc
cagcccctccagggcgagaggtccgggcgagacaccccagccagtgtggactccatccct
ctggagtgggaccatgactatgacctcagtcgtgacctggagtctgctgtgtccagaact
ctgccctctgaggatgaagagggtcaggaagataaagatttctatctcaggggagctgtt
ggtctgtcagatgtaacgatccccgaaagtcccgaggcctatgttaaactcacagaaagt
gcaatcagaaatccctctggggatcctagcaccttggagtcacagatccaacaactgggc
aaagccctggatgacagccactttcagatgcagcaaatggagaatattatccacagcaaa
actcctgcaggaccagagctagactccagctacagaggctatatgaaactgctgggtgaa
tgcagcggcagtatagactcagtgaaaagactggaacacaaactgacagaggaagaggag
cattttccaggctttgttaacctgaatagcaccgaaacccaaacagctggtgtgattgac
cgctgggagctcctccaggcgcaggccctgagcaaggagctgaggaggaaacagaatccc
cagaggtggcagcagtttcactcggacctgagccgcgtgctgacctggctgcaggagacg
gaggaggacctggaacagcttcagcgccggcagcgcagcactgatatccagcccatcgcg
cttcagatcaaaaaactcaaggagctccagaaagctgtggaccaccacaaggccatcatc
ctctccatcaacctgtgcagctccgagttcactcagactggcagtgaggagagccaggat
ctgcagggtcgcttgtcccagatgaatggccgctgggaccgcgtgtgctccctgctggag
gaatggcggggcctcctccaggacgcgctgatgcagtgtcaggatttccatgaaatgagt
catggtttgcttcttatgcttgagaacattgacagaaggaaaaatgaaatcgtgccggtt
gattctaaccttgatgcagagatacttcaggaccatctcaaacagcttacgcaaataagg
catgagctgttggaatcccagctcaaagtggcctcactgcaagacatgtctcgccaacta
ttggtgaacgctgaaggcacagactgtttagaagccaaagaaaaagtgcatgtgattgga
aatcggctcaaacttctcctgaaggaggtcagtcatcatatcaaggagctggagaagtta
ttagacatgtcaagcagtcagcaggatttgtcttcctggtcttctgctgatgaactggac
acctcaggatctgtgagtcctacatcaggaagaagtagcccaaacaggcagaaaacgcca
cgaggcaaatgtagtctctcacagcctggaccctctgtcaacagtccacatagcaggtcc
ataaaaggtggctccgattcctccctttctgagcctcggccagcccggtccggccgagcc
ttcctgttcagagtcctccgagcggctcttcctcttcagcttctcctgctgttcctcatt
gggctcgcctgcctagtaccaatgtcacaggaggactacagttgcgccctctccaacaat
tttgcccgatcattccaccccatgctcagatacacaaatggccctcctccgctctga
DBGET
integrated database retrieval system
