KEGG   Globicephala melas (long-finned pilot whale): 115851619
Entry
115851619         CDS       T11080                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04340  Hedgehog signaling pathway
gmf04360  Axon guidance
gmf05200  Pathways in cancer
gmf05205  Proteoglycans in cancer
gmf05217  Basal cell carcinoma
gmf05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    115851619 (SHH)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    115851619 (SHH)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    115851619 (SHH)
   05205 Proteoglycans in cancer
    115851619 (SHH)
  09162 Cancer: specific types
   05226 Gastric cancer
    115851619 (SHH)
   05217 Basal cell carcinoma
    115851619 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gmf01002]
    115851619 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:gmf00536]
    115851619 (SHH)
Peptidases and inhibitors [BR:gmf01002]
 Cysteine peptidases
  Family C46: hedgehog family
   115851619 (SHH)
Glycosaminoglycan binding proteins [BR:gmf00536]
 Heparan sulfate / Heparin
  Morphogens
   115851619 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 VldE Vint Ribosomal_S6e DrmE_C
Other DBs
NCBI-GeneID: 115851619
NCBI-ProteinID: XP_030709549
LinkDB
Position
9:2357157..2366707
AA seq 461 aa
MDEMLLLARCLLVVLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRTKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSD
FLTFLDRDHGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAGREPEALSGAGRPPGG
APERRALFASSVRPGQHVYVVAERGGDRRLLPAAVHSVTLREESTGAYAPLTAQGTILIN
RVLASCYAVIEEHNWAHRAFAPYRLAHALLAALAPSRTDRGGGGGGGRVPPAAPGAPAVP
GATDAPGASGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggacgagatgctactgctggcgagatgtctgctggtggtgctggtctcctcactgctg
atgtgctcggggcttgcgtgcggacccggccggggatttgggaagaggcggaacccaaaa
aaactgacccctttagcctacaagcagttcatccccaacgtggctgagaagaccctaggg
gccagtggaagatatgaagggaagatcaccagaaactcggagcgatttaaggaactcacc
cccaattacaaccctgacatcatatttaaggatgaagaaaacactggagcggaccggctg
atgactcagcggtgcaaggacaagttgaacgccttagccatctccgtgatgaaccagtgg
ccaggagtgaagctgcgggtgacagagggctgggacgaggacggccaccactcagaggag
tcgctgcactacgagggccgtgcagtggacatcaccacctcggaccgcgaccgcaccaag
tacggcatgctggcgcgcctggccgtggaggccggcttcgactgggtctactacgagtcc
aaagcgcacatccactgctcggtgaaagcagagaactcggtggcggccaaatcgggcggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcaccaagctggtgaaggac
ctgcgccccggagaccgcgtgctggctgccgacgacgagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaccacggcgccaagaaggtcttctacgcgatcgagacc
cgggagcctcgcgagcgtctgctgctcaccgccgcgcacctgctctttgtcgcgccgcac
aacggctcggccggccgggagcccgaggcgctgtcgggcgccgggcggccgcctgggggc
gcgccggagcgccgggcgctcttcgccagcagcgtgcgccctggccagcacgtgtacgtg
gtggccgagcgcggcggggatcggcggctcctgccggccgccgtgcacagcgtgacgctg
cgcgaggagagcacgggcgcgtacgcgccgctgacggcgcagggcaccatcctcatcaac
cgggtgctggcgtcgtgctacgcggtcatagaggagcacaactgggcgcaccgggccttc
gcgccctaccgcctggcgcacgcgctcctggccgcgctggcgccctcgcgcacggaccgc
ggcgggggcgggggcggcggccgcgtgcccccggccgcgccaggtgcgccggctgtgcca
ggtgcgaccgacgcgccaggcgcctcgggcatccactggtactcgcagctgctctaccaa
ataggcacctggctgttggacagcgaggccttgcacccgctcggcatggcggtcaagtcc
agctga

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