Globicephala melas (long-finned pilot whale): 115851755
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Entry
115851755 CDS
T11080
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115851755 (MKRN1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115851755 (MKRN1)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115851755 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_UBOX
zf-CCCH_3
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_PARP12
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115851755
NCBI-ProteinID:
XP_030709860
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All DBs
Position
9:13325292..13354109
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AA seq
480 aa
AA seq
DB search
MAEAAAPGTTATTSGARAAAAAAASPTPTPTVTSPSLGAGGGGGGSDGSSGGWTKQVTCR
YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKPLKQEEATATDL
TAKSPLAASSSLSSVVGPIVEMNMGEAESRNSNFSTVGAGSEDWVNAIEFVPGQPYCGRT
APSSTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQ
VLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGIL
SNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYK
EAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRAQRRNHFWEL
IEEREHGNPFDNDDEEVVTFELGEMLLMLLAAGGDDDLTDSEDEWDLFHDELEDFYDLDL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcagctcccggaacaacagccacaacatcaggagcacgagcggcagcg
gcggcagcggcctcccccacccctacccccacagtcacctccccgtccctgggggcgggg
ggcgggggaggcggcagcgacggcagcagcggcggctggactaaacaggtcacctgcagg
tatttcatgcatggggtttgtaaggaaggagataactgtcgatactcacatgacctctct
gacagtccatatggtgtagtgtgcaagtattttcagcgagggtactgtatttacggagac
cgctgcagatatgaacacagcaagccattgaaacaggaagaagcaactgctacagatcta
actgcaaagtcaccccttgctgcttcctcaagtctctcatcagtagttggaccgattgtt
gaaatgaatatgggcgaagctgagtcaagaaattcaaacttttcaactgtaggagcaggt
tcagaagactgggtgaacgccattgagtttgttcctgggcagccctactgtggccgtact
gccccttcctccactgaagcacccctgcagggctcagtgaccaaggaagaatcagagaag
gagcaaactgcagtggaaacaaagaagcagctctgcccctatgctgcggtgggagagtgc
cgatatggggagaactgtgtgtatctccacggagactcgtgtgatatgtgtgggctgcag
gtcctccacccaatggatgctgcccaaagatcacaacatataaaatcttgcatcgaggcc
catgagaaggacatggagctctcgtttgccgtgcagcgcagcaaggacatggtgtgtggg
atctgcatggaggtggtctatgaaaaagccaaccccagcgagcgccgcttcgggatcctc
tccaactgcaaccacacctactgtctcaagtgtattcgcaagtggaggagtgctaagcaa
tttgagagcaagatcataaagtcctgcccagaatgccgcatcacatctaactttgtcatt
ccaagtgagtactgggtggaggagaaagaagagaagcagaaactcattcagaaatacaag
gaggcaatgagcaacaaggcgtgcaggtattttgatgaaggacgcgggagctgtccattt
ggagggaactgtttttacaagcatgcgtaccctgatggccgtagagaggagccacagaga
cagaaagtgggaacatcaagcagataccgggcccaacgaaggaaccacttctgggagctc
attgaggaaagagagcacggcaaccccttcgacaacgacgacgaagaggttgtcaccttc
gagctgggcgagatgttgcttatgcttttggctgcaggtggggacgacgacctgacggac
tctgaagacgagtgggacttgtttcacgatgagctggaagatttttatgacttggatcta
tag
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integrated database retrieval system
