Globicephala melas (long-finned pilot whale): 115851861
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Entry
115851861 CDS
T11080
Symbol
CHPF2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase isoform X1
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gmf01100
Metabolic pathways
Module
gmf_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115851861 (CHPF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmf01003
]
115851861 (CHPF2)
Enzymes [BR:
gmf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
115851861 (CHPF2)
Glycosyltransferases [BR:
gmf01003
]
Glycan extension
O-Glycan
115851861 (CHPF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
115851861
NCBI-ProteinID:
XP_030710103
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All DBs
Position
9:complement(5875028..5881168)
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AA seq
778 aa
AA seq
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MAGPTAMRLSSVLALLQPALPLILGLSLGCSLSLLRVSWIQGEGEDPCVVAVGEPGGPQN
LDSGAQLDQSDEDFKPRIVPYYRDPNKPYKKVLRTRYIQTELGSRERLLVAVLTSRATLS
TLAVAVNRTVAHHFPRLLYFTGQRGARTPAGMQVVSHGDERPAWLMSETLRHLHTHFGAD
YDWFFVMQDDTYVQAPRLAALAGHLSINQDLYLGRTEEFIGAGEQARYCHGGFGYLLSRS
LLLRLWPHLDGCRGDILSARPDEWLGRCLIDSLGIGCVSQHQGQQYRSFELAKNRDPEKE
GSSAFLSAFAVHPVSEGTLMYRLHKRFSALELERAYSEIEQLQAQIRNLTMLTPEGEAGL
SWPIGLPAPFTPHSRFEVLGWDYFTEQHTFSCADGAPKCPLQGASRADVGDAVETALEQL
NRRYQPRLRFQKQRLLNGYRRFDPARGMEYTLDLLLEAVTQRGHRRALARRVSLLRPLSR
VEILPMPYVTEATRVQLVLPLLVAEAAAAPAFLEAFAAGVLEPREHALLTLLLVYGPREG
GRGAPDPFLGVKAAAAELERRYPGTRLAWLAVRAEAPSQVRLLDVVSKKHPVDTLFFLAT
VWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFSPALAPQRSPQGPPGAGPDPPSPPGAEP
ARGAPVGGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVFLRFSGL
HLFRAVEPGLVQKFSVRDCSPRLSEELYHRCRLSTLEGLGARAQLAVALFEQEQANST
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcccaccgccatgcgactgagctcagtgttggctctgctgcaaccagcactg
cccctcatcctagggctgtctctggggtgcagcctgagcctcttgcgggtttcctggatc
cagggtgagggagaagatccctgtgtagtggctgtgggggaaccaggagggccacagaat
ctagactcaggagctcagcttgaccaaagtgatgaagacttcaaaccccggattgtcccc
tactacagggatcccaacaagccctacaagaaggtgctcaggactcggtacatccagaca
gagctgggctctcgcgagcggttgctggtggctgtcctgacctcccgggccacactgtcc
actctggctgtggctgtgaaccgcacggtggctcaccacttccctcggttactctacttc
actgggcagcgaggggcccggactccggcagggatgcaggtggtatctcacggggacgaa
cggccagcctggctcatgtccgagaccctgcgccatcttcacacacactttggggccgac
tacgactggttcttcgtcatgcaggatgacacgtatgtgcaggccccccgcctggcagcc
ctggctggccacctcagtatcaaccaagacctgtacctgggccggacggaggagttcatt
ggcgcaggcgagcaggcccgatactgccacgggggcttcggctacctgttgtcacggagc
ctcctgcttcgattgtggccacatctggatggctgccgaggagacatcctcagtgcccgt
cctgatgagtggcttggccgctgcctcattgactctctgggcatcggctgtgtctcacag
caccaggggcagcagtatcgctcatttgaactggccaaaaatagggaccccgagaaggag
gggagctcggctttcctgagtgcttttgcggtgcaccctgtctccgagggaaccctcatg
taccggctccacaagcgcttcagtgctctggagctggaacgagcgtacagtgaaatagaa
cagctgcaggctcagatccggaacctgaccatgctgaccccggagggggaggcaggcctg
agctggcccattgggctcccggccccttttacaccgcactcgcgttttgaggtgctgggc
tgggactacttcacagagcagcacaccttctcctgtgcagatggggcccccaagtgccca
ctgcaaggggctagcagggcagatgtgggggacgccgtggagactgctttggagcagctg
aatcggcgctatcagccccgcctgcgcttccagaagcagcggcttctcaatggctaccgg
cgctttgacccagcgcggggcatggagtacaccctggacctgctgctggaagccgtgacg
cagcgcgggcaccggcgggccctggcccgcagggtcagcctgctgcggcccctgagccgg
gtggagatcctccccatgccctacgtcaccgaggccacccgcgtgcagctggtgctgccg
ctgctggtggccgaagccgccgcggcccctgcgttcctggaggcctttgcagccggtgtc
ctggagccgcgagagcatgccctactcaccctgttgctggtctatgggccgcgggaaggg
ggccgaggggccccggacccgtttcttggggtgaaggctgcggcggctgagttggaacga
cggtaccctgggacgaggctggcctggctcgctgtgcgcgcggaggccccttcccaggtg
cggctcctggacgtggtctctaagaagcaccccgtggacacgctcttcttcctcgccacc
gtgtggaccaggcccgggcccgaggtcctcaaccgctgccgcatgaacgccatctccggc
tggcaggccttcttcccggtccacttccaggagttcagccccgccctggcaccacagaga
tctccccaagggcccccgggggccggccccgaccccccgtcccctcctggtgctgagcct
gcccggggggctcccgttgggggcaggtttgaccgacaggcttctgcagagggctgcttc
tacaacgctgactacctggcggcccgagcccggctggctggtgagctggcgggccaggaa
gaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctcagggctc
caccttttccgggccgtggagccagggctggtgcagaagttctccgtgcgtgactgcagc
cctcggctcagcgaggagctctaccaccgctgccgcctgagtaccctggaggggctgggg
gcccgcgcgcagctcgccgtggctctgttcgaacaggagcaggccaatagcacgtag
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