Globicephala melas (long-finned pilot whale): 115851863
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Entry
115851863 CDS
T11080
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03082
ATP-dependent chromatin remodeling
gmf04714
Thermogenesis
gmf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115851863 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
115851863 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
115851863 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115851863 (SMARCD3)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115851863 (SMARCD3)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115851863 (SMARCD3)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115851863 (SMARCD3)
PBAF complex
115851863 (SMARCD3)
GBAF(ncBAF) complex
115851863 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
115851863
NCBI-ProteinID:
XP_030710110
LinkDB
All DBs
Position
9:5842034..5877109
Genome browser
AA seq
493 aa
AA seq
DB search
MKARERPSLGTDPKLRGLRIPRQTQPPEADVPNASKRPGMPSGARMPHQGAPMGPPGSPY
MGSPAVRPGLAPAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQ
RIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKP
DAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTP
TTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQY
VKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS
DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFML
SFSRDPKGYIQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQR
RQELEQSLVVRNT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccagagagaggccctctctagggacagaccccaagttaaggggtctgaggatc
cctcggcagactcagccaccagaagctgatgtccctaatgcctcaaagcgccccgggatg
ccgtctggagcccggatgccccaccagggggcgcccatgggccccccgggctccccgtac
atgggcagccccgccgtgcgacccggcctggcccccgcgggcatggagcccgcccgcaag
cgagcagcgcccccgcccggccagagccaggcccagagccagggccagccggtgcccacc
gcccccgcgcggagccgcagtgccaagaggaggaagatggctgacaaaatcctccctcaa
aggatccgggagctggtcccagagtcccaggcttacatggacctcctggcctttgagagg
aaactggatcaaaccatcatgcggaagcgggtggacatccaggaggctctgaagaggcca
atgaagcaaaagcggaagctgcgtctttatatctccaacacttttaaccctgcgaagccc
gatgctgaggattctgatggcagcattgcctcctgggagctgcgggtggaggggaagctc
ctggatgaccccagcaagcagaagcggaagttttcttccttcttcaagagtttggtcatt
gagctggacaaagacctttacggccctgacaaccacctagtggagtggcaccggacgccc
accacgcaggagacggatgggttccaggtgaagaggccgggtgacctgagcgtgcgctgc
acgctgctcctcatgctggactaccagcctccccagttcaaactggatccccgcctggcc
cgcctgctggggttgcacacacagagccgctcagccatcgtccaggccctgtggcagtac
gtgaagaccaacaggctgcaggactcgcacgacaaggaatacatcaacggggacaagtat
ttccagcagatttttgactgtccccggctgaagttttctgagattccccagcgcctcaca
gctctgctattgccccctgacccaattgtcatcaaccacgtcatcagcgtggacccatca
gaccagaagaagacggcgtgctatgacattgatgtggaggtagaggagccactgaaggga
cagatgagcagcttcctcctgtccacggccaaccagcaggagatcagcgccctggacagt
aagatccatgagacgattgagtccataaaccagctcaagatccagagggacttcatgcta
agcttctccagagaccccaaaggctacatccaagacctcctccgctcccagagccgggac
ctcaaggtgatgacagatgtggcaggcaaccctgaggaggagcgccgggctgagttctac
caccagccctggtcccaggaagctgtcagccgctacttctactgcaagatccagcagcgc
aggcaggagctggagcagtccctggttgtgcgcaacacctag
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