Globicephala melas (long-finned pilot whale): 115851931
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Entry
115851931 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115851931
03015 mRNA surveillance pathway
115851931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115851931
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115851931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_ACIN1
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
115851931
NCBI-ProteinID:
XP_030710266
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All DBs
Position
9:complement(15092929..>15093912)
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AA seq
280 aa
AA seq
DB search
TPQKGRIDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRFDEKSKDRSKDKGATKESSE
KDPGRDKTGKRRSASSGSSSTRSRSSSTSSSGSSSGSSSSSASSHSGSSSTSPSCSSGSS
PGSPSPSRRRPDNRQRSRSKSKPPKRDGRERRRRSPSPKPTKVHIGRLTRNVTKDHILEI
FSIFGKIKMIDIPVDRMHPRLSKGYAYVEFENPDEAEKALKHTDGGQVPLRAGPPCAGDP
APRAAAATGAAPAPPSPSKQGXPKLCPVTCIPSNSLLSLF
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
acacctcagaaggggagaatagatttatcaggagtgaaaaagaagagcttgctaggagtc
aaagaaaataataaaaagtccagcactagggctccttctcctaccaaacgcaaagaccgc
tttgatgagaagtccaaggatcgctccaaagataagggggccaccaaggagtcgagcgag
aaggatcctggcagggataaaactggaaagaggcgcagcgcttccagtggtagcagcagc
accaggtctcggtccagctcgacctccagctcgggctccagcagcggctccagctcatct
tctgcatcgagccactcaggaagttccagcacatcccccagctgcagctccggcagctcc
cctggctctccgagtccttctcggcgcaggcctgacaacaggcagcgttcccgctccaaa
tccaaaccacccaaaagagatggaagggaaaggagaaggcggagcccttcccctaaaccc
accaaagtgcacattggaaggctcaccaggaatgtgaccaaggatcatatcctggagata
ttctccatcttcgggaaaattaaaatgattgacatacctgtagacaggatgcacccccgt
ctgtctaaaggctacgcatatgtggagtttgaaaatccagatgaggccgagaaggcgctg
aagcatacggacggaggacaagttcccctccgcgcaggtcccccgtgcgccggcgatcct
gctccccgggccgccgctgccacaggagccgccccagctccaccttctcccagtaagcag
ggcncaccgaagctctgccctgtgacttgtatcccgtccaactcacttttgtcacttttc
tag
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