Globicephala melas (long-finned pilot whale): 115852049
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Entry
115852049 CDS
T11080
Symbol
ALS2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05014
Amyotrophic lateral sclerosis
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115852049 (ALS2)
05022 Pathways of neurodegeneration - multiple diseases
115852049 (ALS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115852049 (ALS2)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115852049 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
PH_alsin
Alsin_RLD
RhoGEF
DH_ALS2
HA_Alsin
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
115852049
NCBI-ProteinID:
XP_030710332
LinkDB
All DBs
Position
7:33690230..33776477
Genome browser
AA seq
1681 aa
AA seq
DB search
MDSKKKSSTEAEGSKERGLVHVWQAGSCSVTPERLPGWGGKTVLHAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEICPSSPILEEVLVGQYVVTVATGSFHNGAVTESGVVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQSENQASTAISPSTETLDGKGEVFENTFVQNELP
AATELNVGNVQTTSVETISSPQDVMGTPEISSARSIPSYPDTQAVNEYVQKLSDHSVREN
SENGEKPVPSQPLVAEAIPNLHSPATTSTSALNSLVVSCASAVGVRVAATYEAGTLSLKK
VMNFYSTAPCEPGAQAGSSPIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSR
RLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG
HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV
PRLVKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRQDPTEGDNLPENHSGTKTPI
LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERQFYSKLSDIKSQILRPL
LSLENLGTASTVQLLQEVASRFSKLCYLIGQHGTSLSSFLQGIKEARSLVILKHASLFLD
SYTEYCTSITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLP
IRRLHNYAKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFP
GKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLW
AEPLSEEAGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGMSDFPPYGSG
SSIQRQEPPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKIYSGMFRNGL
EDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRS
GKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEG
NFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKIT
GTYFKPSLYESDKDRPKVFRKLGNLAVPADEKWKAVFDECWHQLGCENPGQGEVWKAWDN
IAVALTTSRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPL
HPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEITSYLKRIFQLVRFLFPELPEEGTTI
PLSAPLPTERKSFCTGKSDSRSESPEPGYVVTGSGLLLPVLLPRLYPPLFMLYALDNDRE
EDVYWECVLRLNKQPDIALLGFLGVQRKFWPVNLSVLGESKKVLPTTKDACFASAVECLQ
QISTTFTPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSE
VHLIEDLMDPYLQHGEQGIMFTTLKLSHQGIHDGRGSMQLLLPYPDPRPGAHPNRSLLPP
D
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagaaaagctcaacagaagctgaaggatccaaagaaagaggcctggtc
catgtgtggcaggcaggctcctgttctgtaacaccagagagattgccaggctggggagga
aagactgttcttcatgcggcccttggagtgaaacatggagttcttctgactgaagatggt
gaggtctacagctttgggactctcccctggagaagtgaaccagcagagatttgtccgagt
agccccattctagaagaggtgctggttgggcagtatgttgttactgtggcaacagggagt
ttccacaacggagcagtgacagaaagtggcgtagtgtacatgtggggggagaactctgct
ggccagtgtgcggtagctaaccagcagtatgttccggaaccaaatcctgtcagcatttct
gattccgagaccagtcctttgttagcggtcaggatcttgcagctggcatgtggcgaggag
cacactctggcattgtccctaagcagggagatttgggcatggggtaccggttgtcagttg
ggtctcattaccactaccttcccagtgacaaagccacaaaaggtggaacatcttgctggg
cgagtagtgctacaagttgcctgtggtgcgttccacagcttagccctggtgcagtgcctc
ccttcccaggatctgaagccagtgccagaaagatgtaaccagtgcagccagctgttaatt
acaatgactgacaaagaagaccatgtgattatatcagacagccattgctgtccattaggc
gtgacactgtcagaatcccagtcagaaaaccaggccagcactgccatcagcccctccact
gaaacccttgatggcaagggagaagtgtttgagaacaccttcgtacaaaatgagctgcct
gctgctaccgaactgaatgttggaaatgttcagaccacaagtgttgagaccatttcctcc
ccacaagatgtcatgggaacacctgaaatttcttctgcaagaagtataccatcgtaccct
gacactcaggcagtaaatgagtatgtgcagaaactgtcagatcattcagtaagagagaac
tcagagaatggtgaaaagccagtgccatctcagcctcttgtagcagaagcgattcctaat
cttcacagcccagcaaccacaagcacttcagccctgaacagcctagtggtctcttgtgca
tctgctgttggtgtgagagtggctgctacatatgaagctgggaccttgtctcttaagaaa
gttatgaacttttatagtacagccccttgtgaacctggagctcaggcaggcagtagtccc
ataggcccagaaggtctgaaagatagcagagaagaacaggttaaacaggagtcaatgcaa
ggaaagaagagttcaagtcttgtggatatcagagaagaagagtcagagggaggcagccga
agactctctctccctggattgttgtcacaagtctcccccaggctcttgagaaaagctgca
agggtgaaaacgcggacagtggttctgacccctacatacagtggagaagcggatgcgctc
ctgccttctctgagaacagaggtgtggacctgggggaaagggaaggaaggacagctgggg
catggtgatgttctgcctaggcttcaaccattgtgtgtaaaatgtctggatggtaaagaa
gtaatccatctggaggcaggtggttaccattctcttgcacttactgcgaaatcccaggtt
tactcgtggggtagcaatacctttggtcaacttgggcattccgattttccaacaacagtt
cctcgtcttgtaaaggtgaacagtgaaaatggagtctggagtgtagctgcaggccaggat
tattccctgtttttagtggataccgaagacttccagcctggattatgttacagtggccgg
caggacccgacagaaggtgacaaccttccagagaatcacagtggtactaagactccaata
cttctctcctgtagtaagcttggatatataagcagagtgacagcaggaaaagacagctat
ctagccttggtggacaaaaacattatgggatatattgccagtctccatgagttggctact
acagaaagacagttctattcaaaactaagtgatatcaagtctcagattctgaggcctctt
ctcagtttagaaaacttgggcactgcaagtacagtccagctgttgcaggaggtagcaagc
cggttcagcaagctgtgttacctaattggtcaacatggaacctcactgagcagcttcctt
caggggataaaggaagccaggagtttggtcatcctgaagcatgcaagcctcttcttggat
agttatacagagtattgcacatctattacaaatttcctggttatgggaggattccagctt
cttgctaagcctgccattgatttcctaaataaaaaccaggaactattgcaagatttatca
gaagtgaatgatgaaaacacccaattgatggaaatattgaataccttgtttttcttgcca
atcagacgacttcataattatgccaaagttttgctaaagcttgctacttgttttgaagtg
acatctccagaataccagaaactgcaggattccagttcttgttatgagtctcttgctctc
catctcggcaggaaaaggaaggaagcagaatacacactgggtttctggaagacctttcct
ggaaaaatgacggattccttgaggaagccagagcgtcgactgctgtgtgagagcagtaac
cgggccctgtctctgcagcatgctgggaggttttctgtgaattggttcattctctttaat
gatgccctagtccatgcccagttctccacacaccatgttttccctttggccacactgtgg
gcagagccactttctgaagaagctggtggtgtgaatggcctaaagataactacacccgag
gagcagttcactctcatttcatcaacaccccaggaaaagacaaagtggctccgggctata
agccaagctgtagatcaggctttgagggggatgtctgattttccaccttatggaagtggc
agcagtattcagaggcaggaaccacccatttcgcgcagtgccaaatatactttctacaag
gatcctcgcctaaaggatgcaacctatgatggacgctggctttcagggaagcctcatggc
agaggggttttgaagtggccagatggaaagatctattctggcatgttcaggaatggcttg
gaagatgggtatggagaatacaggatcccaaacaaagcactgaacaaagaagaccattat
gtgggccattggaaagaaggaaaaatgtgtggtcaaggagtctatagttatgcctctggt
gaagtttttgaaggctgttttcaagataacatgcgtcatggtcatggtctcctgcgaagt
ggaaagttgacttcatcttctcccagtatgttcattggccagtgggtaatggataagaaa
gccggatacggtgtctttgatgatatcactagaggggagaagtacatgggaatgtggcaa
gatgatgtatgtcaagggaatggtgtggtagttacccagtttggattatactatgaaggc
aacttccaccttaataaaatgatgggaaatggagttttactttctgaagatgatactatc
tatgagggagaattttcagatgattggaccctgagtggaaagggaacattgactatgcca
aatggagactacattgaaggttattttagtggagaatggggatctggaataaaaatcacg
ggaacgtactttaagcctagtctgtatgagagtgataaagacagacctaaagttttcagg
aagcttggaaacctggcagtgccggctgatgagaagtggaaagcagtgtttgatgaatgt
tggcatcagcttggctgtgagaacccaggccaaggggaagtttggaaagcgtgggacaat
attgctgtggccctgactaccagtcggcgccaacacagagacagtccagagatattaagt
cgttcacagactcagacactagagagtttggaattcattcctcagcatgttggtgccttc
tctgtggagaaatatgatgacatcaagaaatatttaataaaggcctgcgacactcctctg
cacccactgggcaggctcgtggagacactggttgcagtgtatagaatgacatatgtgggt
gtgggagccaaccgccggctgctgcaggaggctgtgaaggagattacatcctacctgaag
cgaattttccagctggtgaggttcttatttcctgagcttcctgaagagggcaccacaatt
cctctctctgctcctctgccaactgaaagaaaatccttttgcactgggaagtcagattcc
agatctgaatcaccagagccaggttatgtggtaacaggttctgggttactgcttcctgtg
ctcctacctcggctctacccaccgctgttcatgctttatgccctggataatgatcgtgag
gaagatgtttactgggaatgtgttctccgactaaataagcagccagacattgctcttttg
ggcttcctcggggtgcagaggaaattttggccagtgaacttgtcagtccttggagagagt
aaaaaggttttgccaaccacaaaagatgcttgttttgcctcagctgtagaatgtctacag
cagatcagcacaacgtttaccccatcagacaaacttaaagtcatccagcagacttttgaa
gagatctctcagagtgtcctggcctcacttcaggaagacttcttgtggtccatggatgat
ttgtttcctgttttcttatatgtggtgctacgggccaggatcaggaatttaggctctgaa
gtacacctcatcgaggatctcatggacccatatcttcagcatggggaacagggtataatg
ttcaccactttgaagctttcccaccagggtattcatgatgggagaggttctatgcagtta
cttctaccataccctgaccccagacctggagcacatccaaataggagtcttctgcctccc
gactag
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integrated database retrieval system
